Clone: 03996259806504221 E07
Tagged gene: CG34178
Identifier: FBgn0085207
Clone | FlyFos026519(pRedFlp-Hgr)(CG34178[33091]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
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Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2L | ||||||||
4457186 | 4458373 | 9672 | 10859 | + | gene | RpL27A | coding_transcript | |
4455193 | 4456822 | 11223 | 12852 | + | gene | Gs1l | coding_transcript | |
4454664 | 4455207 | 12838 | 13381 | - | gene | CG15434 | coding_transcript | |
4453167 | 4454457 | 13588 | 14878 | + | gene | CG15440 | coding_transcript | |
4449289 | 4453004 | 15041 | 18756 | + | gene | CG15439 | coding_transcript | |
4446662 | 4448637 | 19408 | 21383 | + | gene | CG15438 | coding_transcript | |
4444732 | 4446765 | 21280 | 23313 | - | gene | Elp3 | coding_transcript | |
4442870 | 4444677 | 23368 | 25175 | + | gene | morgue | coding_transcript | |
4442429 | 4442985 | 25060 | 25616 | - | gene | CG15432 | coding_transcript | |
4441429 | 4442060 | 25985 | 26616 | + | gene | Sfp24F | coding_transcript | |
4437787 | 4438201 | 29844 | 30258 | - | gene | CG43056 | coding_transcript | |
4433908 | 4435057 | 32988 | 35199 | - | gene | CG34177 | coding_transcript | |
4433908 | 4435057 | 32988 | 35199 | - | gene | CG34178 | coding_transcript | |
4433908 | 4435057 | 32988 | 35199 | - | mrna | FBtr0112369 | coding_transcript | |
4433908 | 4435057 | 32988 | 35199 | - | mrna | FBtr0112370 | coding_transcript | |
4433908 | 4435057 | 32988 | 35199 | - | mrna | FBtr0112368 | coding_transcript | |
4434854 | 4435057 | 32988 | 34253 | - | exon | coding_transcript | ||
4434854 | 4435057 | 32988 | 34253 | - | exon | coding_transcript | ||
4434854 | 4435057 | 32988 | 34253 | - | exon | coding_transcript | ||
4434854 | 4435057 | 32988 | 34253 | - | three_prime_utr | coding_transcript | ||
4434957 | 4435057 | 32988 | 33088 | - | three_prime_utr | coding_transcript | ||
4434957 | 4435057 | 32988 | 33088 | - | three_prime_utr | coding_transcript | ||
4434854 | 4434956 | 33089 | 34253 | - | cds | coding_transcript | ||
4434854 | 4434956 | 33089 | 34253 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 33165 | 33198 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 33206 | 33277 | - | cds | BLRP | CLC | |
2337 | 2357 | 33278 | 33298 | - | cds | TEV | CLC | |
2313 | 2336 | 33299 | 33322 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 33323 | 33364 | - | cds | V5 | CLC | |
1548 | 2264 | 33371 | 34087 | - | cds | SGFP | CLC | |
1482 | 1541 | 34094 | 34153 | - | cds | 2xTY1 | CLC | |
dmel-5.43-2L | ||||||||
4434754 | 4434853 | 34254 | 34353 | - | intron | coding_transcript | ||
4434754 | 4434853 | 34254 | 34353 | - | intron | coding_transcript | ||
4434754 | 4434853 | 34254 | 34353 | - | intron | coding_transcript | ||
4434621 | 4434753 | 34354 | 34486 | - | exon | coding_transcript | ||
4434621 | 4434753 | 34354 | 34486 | - | cds | coding_transcript | ||
4434621 | 4434753 | 34354 | 34486 | - | exon | coding_transcript | ||
4434621 | 4434753 | 34354 | 34486 | - | cds | coding_transcript | ||
4434621 | 4434753 | 34354 | 34486 | - | exon | coding_transcript | ||
4434621 | 4434753 | 34354 | 34486 | - | three_prime_utr | coding_transcript | ||
4434570 | 4434620 | 34487 | 34537 | - | intron | coding_transcript | ||
4434570 | 4434620 | 34487 | 34537 | - | intron | coding_transcript | ||
4434570 | 4434620 | 34487 | 34537 | - | intron | coding_transcript | ||
4434298 | 4434569 | 34538 | 34809 | - | exon | coding_transcript | ||
4434298 | 4434569 | 34538 | 34809 | - | exon | coding_transcript | ||
4434298 | 4434569 | 34538 | 34809 | - | exon | coding_transcript | ||
4434401 | 4434569 | 34538 | 34706 | - | three_prime_utr | coding_transcript | ||
4434467 | 4434569 | 34538 | 34640 | - | cds | coding_transcript | ||
4434467 | 4434569 | 34538 | 34640 | - | cds | coding_transcript | ||
4434298 | 4434466 | 34641 | 34809 | - | five_prime_utr | coding_transcript | ||
4434298 | 4434466 | 34641 | 34809 | - | five_prime_utr | coding_transcript | ||
4434298 | 4434400 | 34707 | 34809 | - | cds | coding_transcript | ||
4434239 | 4434297 | 34810 | 34868 | - | intron | coding_transcript | ||
4434239 | 4434297 | 34810 | 34868 | - | intron | coding_transcript | ||
4434239 | 4434297 | 34810 | 34868 | - | intron | coding_transcript | ||
4433908 | 4434238 | 34869 | 35199 | - | exon | coding_transcript | ||
4433908 | 4434238 | 34869 | 35199 | - | five_prime_utr | coding_transcript | ||
4434115 | 4434238 | 34869 | 34992 | - | exon | coding_transcript | ||
4434115 | 4434238 | 34869 | 34992 | - | five_prime_utr | coding_transcript | ||
4434115 | 4434238 | 34869 | 34992 | - | exon | coding_transcript | ||
4434115 | 4434238 | 34869 | 34992 | - | cds | coding_transcript | ||
4434057 | 4434114 | 34993 | 35050 | - | intron | coding_transcript | ||
4434057 | 4434114 | 34993 | 35050 | - | intron | coding_transcript | ||
4433908 | 4434056 | 35051 | 35199 | - | exon | coding_transcript | ||
4433908 | 4434056 | 35051 | 35199 | - | five_prime_utr | coding_transcript | ||
4433908 | 4434056 | 35051 | 35199 | - | exon | coding_transcript | ||
4433960 | 4434056 | 35051 | 35147 | - | cds | coding_transcript | ||
4433908 | 4433959 | 35148 | 35199 | - | five_prime_utr | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
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CG34178[33091]::S000169_fly_pretag_rev
AAAATTCACTTTCACCTAAATTTAAACACATTATGTAACTAGAAATTTCActtgtcgtcgtcatccttgtagtca
|
Fasta |
CG34178[33091]::S000169_fly_pretag_fwd
ATGGGGATGCCAATTATCCAGATTGTTGCTACCGCAAACTTGAGTGCGACgaagtgcataccaatcaggacccgc
|
Fasta |