Clone: 03996259806504221 A06

Tagged gene: Pmm45A
Identifier: FBgn0033377

Clone FlyFos026516(pRedFlp-Hgr)(Pmm45A[19266]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2R
4986075 4990658 10436 15019 + gene CG8777 coding_transcript
4990749 4994301 15110 18662 + gene Vang coding_transcript
4994647 4997228 19008 22651 - gene Pmm45A coding_transcript
4994647 4997228 19008 22651 - mrna FBtr0088629 coding_transcript
4994647 4997228 19008 22651 - mrna FBtr0088630 coding_transcript
4994647 4996511 19008 21934 - exon coding_transcript
4994647 4994962 19008 20385 - exon coding_transcript
4994647 4994902 19008 19263 - three_prime_utr coding_transcript
4994647 4994902 19008 19263 - three_prime_utr coding_transcript
4994903 4996511 19264 21934 - cds coding_transcript
4994903 4994962 19264 20385 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 19340 19373 - misc_recomb FRT CLC
2358 2429 19381 19452 - cds BLRP CLC
2337 2357 19453 19473 - cds TEV CLC
2313 2336 19474 19497 - cds Precision cut site CLC
2271 2312 19498 19539 - cds V5 CLC
1548 2264 19546 20262 - cds SGFP CLC
1482 1541 20269 20328 - cds 2xTY1 CLC
dmel-5.43-2R
4994963 4995079 20386 20502 - intron coding_transcript
4995080 4996511 20503 21934 - exon coding_transcript
4995080 4996511 20503 21934 - cds coding_transcript
4996512 4996575 21935 21998 - intron coding_transcript
4996512 4996575 21935 21998 - intron coding_transcript
4996576 4996677 21999 22100 - exon coding_transcript
4996576 4996677 21999 22100 - cds coding_transcript
4996576 4996677 21999 22100 - exon coding_transcript
4996576 4996677 21999 22100 - cds coding_transcript
4996678 4996738 22101 22161 - intron coding_transcript
4996678 4996738 22101 22161 - intron coding_transcript
4996739 4997228 22162 22651 - exon coding_transcript
4996739 4997228 22162 22651 - exon coding_transcript
4996739 4996899 22162 22322 - cds coding_transcript
4996739 4996899 22162 22322 - cds coding_transcript
4996900 4997228 22323 22651 - five_prime_utr coding_transcript
4996900 4997228 22323 22651 - five_prime_utr coding_transcript
4998306 4999087 23729 24510 + gene tsu coding_transcript
4999010 5001458 24433 26881 - gene Mys45A coding_transcript
5001768 5003535 27191 28958 + gene Phax coding_transcript
5003631 5009507 29054 34930 + gene Su(var)2-10 coding_transcript
5009630 5010814 35053 36237 + gene CG11784 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
Pmm45A[19266]::S000169_fly_pretag_fwd
TCGAGGAATTCTACGAGCCAAGCAAGAACGGCCTCCAGCGCAGGAAGGAAgaagtgcataccaatcaggacccgc
fasta Fasta
Pmm45A[19266]::S000169_fly_pretag_rev
TCTTTCGTCCCAGTCGCCTAGCGTATCCGCTTAAAGGTGCATTCGGATTActtgtcgtcgtcatccttgtagtca
fasta Fasta