Clone: 03996259806504221 C05
Tagged gene: mr
Identifier: FBgn0002791
Clone | FlyFos026509(pRedFlp-Hgr)(mr[38572]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2R | ||||||||
19834482 | 19836137 | 10194 | 11849 | - | gene | CG13565 | coding_transcript | |
19836724 | 19839984 | 12436 | 15696 | + | gene | CG2970 | coding_transcript | |
19838029 | 19839622 | 13741 | 15334 | + | gene | fzr2 | coding_transcript | |
19840040 | 19841538 | 15752 | 17250 | - | gene | CG3803 | coding_transcript | |
19841616 | 19843930 | 17328 | 19642 | + | gene | thoc5 | coding_transcript | |
19843858 | 19844926 | 19570 | 20638 | - | gene | CG16787 | coding_transcript | |
19845630 | 19849148 | 21342 | 24860 | + | gene | alpha-catenin-related | coding_transcript | |
19849178 | 19850034 | 24890 | 25746 | - | gene | CG13566 | coding_transcript | |
19850498 | 19852164 | 26210 | 27876 | + | gene | Fmo-1 | coding_transcript | |
19852290 | 19854280 | 28002 | 29992 | + | gene | Alas | coding_transcript | |
19854647 | 19855239 | 30359 | 30951 | - | gene | CG34213 | coding_transcript | |
19855465 | 19856466 | 31177 | 32178 | + | gene | or | coding_transcript | |
19856584 | 19857592 | 32296 | 33304 | - | gene | CG10904 | coding_transcript | |
19857830 | 19859756 | 33542 | 35468 | + | gene | CG3065 | coding_transcript | |
19859956 | 19862935 | 35668 | 39709 | + | gene | mr | coding_transcript | |
19859956 | 19862935 | 35668 | 39709 | + | mrna | FBtr0072156 | coding_transcript | |
19859956 | 19860094 | 35668 | 35806 | + | exon | coding_transcript | ||
19859956 | 19860031 | 35668 | 35743 | + | five_prime_utr | coding_transcript | ||
19860032 | 19860094 | 35744 | 35806 | + | cds | coding_transcript | ||
19860095 | 19860155 | 35807 | 35867 | + | intron | coding_transcript | ||
19860156 | 19860672 | 35868 | 36384 | + | exon | coding_transcript | ||
19860156 | 19860672 | 35868 | 36384 | + | cds | coding_transcript | ||
19860673 | 19860728 | 36385 | 36440 | + | intron | coding_transcript | ||
19860729 | 19860967 | 36441 | 36679 | + | exon | coding_transcript | ||
19860729 | 19860967 | 36441 | 36679 | + | cds | coding_transcript | ||
19860968 | 19861042 | 36680 | 36754 | + | intron | coding_transcript | ||
19861043 | 19861223 | 36755 | 36935 | + | exon | coding_transcript | ||
19861043 | 19861223 | 36755 | 36935 | + | cds | coding_transcript | ||
19861224 | 19861282 | 36936 | 36994 | + | intron | coding_transcript | ||
19861283 | 19861984 | 36995 | 37696 | + | exon | coding_transcript | ||
19861283 | 19861984 | 36995 | 37696 | + | cds | coding_transcript | ||
19861985 | 19862035 | 37697 | 37747 | + | intron | coding_transcript | ||
19862036 | 19862299 | 37748 | 38011 | + | exon | coding_transcript | ||
19862036 | 19862299 | 37748 | 38011 | + | cds | coding_transcript | ||
19862300 | 19862364 | 38012 | 38076 | + | intron | coding_transcript | ||
19862365 | 19862606 | 38077 | 38318 | + | exon | coding_transcript | ||
19862365 | 19862606 | 38077 | 38318 | + | cds | coding_transcript | ||
19862607 | 19862662 | 38319 | 38374 | + | intron | coding_transcript | ||
19862663 | 19862935 | 38375 | 39709 | + | exon | coding_transcript | ||
19862663 | 19862863 | 38375 | 39637 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 38573 | 38632 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 38639 | 39355 | + | cds | SGFP | CLC | |
2271 | 2312 | 39362 | 39403 | + | cds | V5 | CLC | |
2313 | 2336 | 39404 | 39427 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 39428 | 39448 | + | cds | TEV | CLC | |
2358 | 2429 | 39449 | 39520 | + | cds | BLRP | CLC | |
3813 | 3846 | 39528 | 39561 | + | misc_recomb | FRT | CLC | |
dmel-5.43-2R | ||||||||
19862864 | 19862935 | 39638 | 39709 | + | three_prime_utr | coding_transcript | ||
19863124 | 19864801 | 39898 | 41575 | - | gene | Gadd34 | coding_transcript | |
19866744 | 19872700 | 43518 | 49474 | + | gene | Sox14 | coding_transcript | |
19874197 | 19874832 | 50971 | 51606 | + | gene | CG30178 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
mr[38572]::S000169_fly_pretag_rev
TCATGATTCCTTCAGTCGTTTGCAACTTGGTTTTGGATCTCCGAAACTTActtgtcgtcgtcatccttgtagtca
|
Fasta |
mr[38572]::S000169_fly_pretag_fwd
TCAGGGAGCACAAGCTAATATTCTCGGGTGGAGTTTACCAATTGGCCAAAgaagtgcataccaatcaggacccgc
|
Fasta |