Clone: 03996259806504221 E04
Tagged gene: Nep3
Identifier: FBgn0031081
Clone | FlyFos026504(pRedFlp-Hgr)(Nep3[44498]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-X | ||||||||
19852426 | 19853421 | 35434 | 36429 | - | gene | CG12655 | coding_transcript | |
19855330 | 19862712 | 38338 | 46782 | + | gene | Nep3 | coding_transcript | |
19855330 | 19862712 | 38338 | 46782 | + | mrna | FBtr0307555 | coding_transcript | |
19855330 | 19855633 | 38338 | 38641 | + | exon | coding_transcript | ||
19855330 | 19855633 | 38338 | 38641 | + | five_prime_utr | coding_transcript | ||
19855634 | 19857987 | 38642 | 40995 | + | intron | coding_transcript | ||
19855722 | 19862512 | 38730 | 46582 | + | mrna | FBtr0070000 | coding_transcript | |
19855722 | 19855878 | 38730 | 38886 | + | exon | coding_transcript | ||
19855722 | 19855878 | 38730 | 38886 | + | five_prime_utr | coding_transcript | ||
19855879 | 19857987 | 38887 | 40995 | + | intron | coding_transcript | ||
19857209 | 19862512 | 40217 | 46582 | + | mrna | FBtr0307554 | coding_transcript | |
19857209 | 19857374 | 40217 | 40382 | + | exon | coding_transcript | ||
19857209 | 19857374 | 40217 | 40382 | + | five_prime_utr | coding_transcript | ||
19857375 | 19857987 | 40383 | 40995 | + | intron | coding_transcript | ||
19857988 | 19858104 | 40996 | 41112 | + | exon | coding_transcript | ||
19857988 | 19858104 | 40996 | 41112 | + | cds | coding_transcript | ||
19857988 | 19858104 | 40996 | 41112 | + | exon | coding_transcript | ||
19857988 | 19858104 | 40996 | 41112 | + | cds | coding_transcript | ||
19857988 | 19858104 | 40996 | 41112 | + | exon | coding_transcript | ||
19857988 | 19858104 | 40996 | 41112 | + | cds | coding_transcript | ||
19858105 | 19858814 | 41113 | 41822 | + | intron | coding_transcript | ||
19858105 | 19858814 | 41113 | 41822 | + | intron | coding_transcript | ||
19858105 | 19858814 | 41113 | 41822 | + | intron | coding_transcript | ||
19858815 | 19858977 | 41823 | 41985 | + | exon | coding_transcript | ||
19858815 | 19858977 | 41823 | 41985 | + | cds | coding_transcript | ||
19858815 | 19858977 | 41823 | 41985 | + | exon | coding_transcript | ||
19858815 | 19858977 | 41823 | 41985 | + | cds | coding_transcript | ||
19858815 | 19858977 | 41823 | 41985 | + | exon | coding_transcript | ||
19858815 | 19858977 | 41823 | 41985 | + | cds | coding_transcript | ||
19858978 | 19859038 | 41986 | 42046 | + | intron | coding_transcript | ||
19858978 | 19859038 | 41986 | 42046 | + | intron | coding_transcript | ||
19858978 | 19859038 | 41986 | 42046 | + | intron | coding_transcript | ||
19859039 | 19859159 | 42047 | 42167 | + | exon | coding_transcript | ||
19859039 | 19859159 | 42047 | 42167 | + | cds | coding_transcript | ||
19859039 | 19859159 | 42047 | 42167 | + | exon | coding_transcript | ||
19859039 | 19859159 | 42047 | 42167 | + | cds | coding_transcript | ||
19859039 | 19859159 | 42047 | 42167 | + | exon | coding_transcript | ||
19859039 | 19859159 | 42047 | 42167 | + | cds | coding_transcript | ||
19859160 | 19859229 | 42168 | 42237 | + | intron | coding_transcript | ||
19859160 | 19859229 | 42168 | 42237 | + | intron | coding_transcript | ||
19859160 | 19859229 | 42168 | 42237 | + | intron | coding_transcript | ||
19859230 | 19859544 | 42238 | 42552 | + | exon | coding_transcript | ||
19859230 | 19859544 | 42238 | 42552 | + | cds | coding_transcript | ||
19859230 | 19859544 | 42238 | 42552 | + | exon | coding_transcript | ||
19859230 | 19859544 | 42238 | 42552 | + | cds | coding_transcript | ||
19859230 | 19859544 | 42238 | 42552 | + | exon | coding_transcript | ||
19859230 | 19859544 | 42238 | 42552 | + | cds | coding_transcript | ||
19859545 | 19859609 | 42553 | 42617 | + | intron | coding_transcript | ||
19859545 | 19859609 | 42553 | 42617 | + | intron | coding_transcript | ||
19859545 | 19859609 | 42553 | 42617 | + | intron | coding_transcript | ||
19859610 | 19860104 | 42618 | 43112 | + | exon | coding_transcript | ||
19859610 | 19860104 | 42618 | 43112 | + | cds | coding_transcript | ||
19859610 | 19860104 | 42618 | 43112 | + | exon | coding_transcript | ||
19859610 | 19860104 | 42618 | 43112 | + | cds | coding_transcript | ||
19859610 | 19860104 | 42618 | 43112 | + | exon | coding_transcript | ||
19859610 | 19860104 | 42618 | 43112 | + | cds | coding_transcript | ||
19860105 | 19860215 | 43113 | 43223 | + | intron | coding_transcript | ||
19860105 | 19860215 | 43113 | 43223 | + | intron | coding_transcript | ||
19860105 | 19860215 | 43113 | 43223 | + | intron | coding_transcript | ||
19860216 | 19861045 | 43224 | 44053 | + | exon | coding_transcript | ||
19860216 | 19861045 | 43224 | 44053 | + | cds | coding_transcript | ||
19860216 | 19861045 | 43224 | 44053 | + | exon | coding_transcript | ||
19860216 | 19861045 | 43224 | 44053 | + | cds | coding_transcript | ||
19860216 | 19861045 | 43224 | 44053 | + | exon | coding_transcript | ||
19860216 | 19861045 | 43224 | 44053 | + | cds | coding_transcript | ||
19861046 | 19861113 | 44054 | 44121 | + | intron | coding_transcript | ||
19861046 | 19861113 | 44054 | 44121 | + | intron | coding_transcript | ||
19861046 | 19861113 | 44054 | 44121 | + | intron | coding_transcript | ||
19861114 | 19861256 | 44122 | 44264 | + | exon | coding_transcript | ||
19861114 | 19861256 | 44122 | 44264 | + | cds | coding_transcript | ||
19861114 | 19861256 | 44122 | 44264 | + | exon | coding_transcript | ||
19861114 | 19861256 | 44122 | 44264 | + | cds | coding_transcript | ||
19861114 | 19861256 | 44122 | 44264 | + | exon | coding_transcript | ||
19861114 | 19861256 | 44122 | 44264 | + | cds | coding_transcript | ||
19861257 | 19861316 | 44265 | 44324 | + | intron | coding_transcript | ||
19861257 | 19861316 | 44265 | 44324 | + | intron | coding_transcript | ||
19861257 | 19861316 | 44265 | 44324 | + | intron | coding_transcript | ||
19861317 | 19862712 | 44325 | 46782 | + | exon | coding_transcript | ||
19861317 | 19862512 | 44325 | 46582 | + | exon | coding_transcript | ||
19861317 | 19862512 | 44325 | 46582 | + | exon | coding_transcript | ||
19861317 | 19861493 | 44325 | 45563 | + | cds | coding_transcript | ||
19861317 | 19861493 | 44325 | 45563 | + | cds | coding_transcript | ||
19861317 | 19861493 | 44325 | 45563 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 44499 | 44558 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 44565 | 45281 | + | cds | SGFP | CLC | |
2271 | 2312 | 45288 | 45329 | + | cds | V5 | CLC | |
2313 | 2336 | 45330 | 45353 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 45354 | 45374 | + | cds | TEV | CLC | |
2358 | 2429 | 45375 | 45446 | + | cds | BLRP | CLC | |
3813 | 3846 | 45454 | 45487 | + | misc_recomb | FRT | CLC | |
dmel-5.43-X | ||||||||
19861494 | 19862712 | 45564 | 46782 | + | three_prime_utr | coding_transcript | ||
19861494 | 19862512 | 45564 | 46582 | + | three_prime_utr | coding_transcript | ||
19861494 | 19862512 | 45564 | 46582 | + | three_prime_utr | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
Nep3[44498]::S000169_fly_pretag_rev
TTGGCTCCATCTTTGGCTCGTTCTGAGATCGAAATTGCACTATCCCCTTActtgtcgtcgtcatccttgtagtca
|
Fasta |
Nep3[44498]::S000169_fly_pretag_fwd
AGTGCAAGCCCGGCAAACGGATGAATCCCACTGAGAAGTGCGAGGTGTGGgaagtgcataccaatcaggacccgc
|
Fasta |