Clone: 03996259806504221 C03

Tagged gene: CG11313
Identifier: FBgn0039798

Clone FlyFos026485(pRedFlp-Hgr)(CG11313[25347]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
26551809 26553719 21505 23415 + gene CG1340 coding_transcript
26555559 26567010 25255 37768 - gene CG11313 coding_transcript
26555559 26567010 25255 37768 - mrna FBtr0300700 coding_transcript
26555559 26556228 25255 26986 - exon coding_transcript
26555559 26555648 25255 25344 - three_prime_utr coding_transcript
26555649 26556228 25345 26986 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 25421 25454 - misc_recomb FRT CLC
2358 2429 25462 25533 - cds BLRP CLC
2337 2357 25534 25554 - cds TEV CLC
2313 2336 25555 25578 - cds Precision cut site CLC
2271 2312 25579 25620 - cds V5 CLC
1548 2264 25627 26343 - cds SGFP CLC
1482 1541 26350 26409 - cds 2xTY1 CLC
dmel-5.43-3R
26556229 26556290 26987 27048 - intron coding_transcript
26556291 26556753 27049 27511 - exon coding_transcript
26556291 26556753 27049 27511 - cds coding_transcript
26556754 26556807 27512 27565 - intron coding_transcript
26556808 26556936 27566 27694 - exon coding_transcript
26556808 26556868 27566 27626 - cds coding_transcript
26556869 26556936 27627 27694 - five_prime_utr coding_transcript
26556937 26566868 27695 37626 - intron coding_transcript
26566869 26567010 37627 37768 - exon coding_transcript
26566869 26567010 37627 37768 - five_prime_utr coding_transcript
26568602 26569637 39360 40395 + gene CG15543 coding_transcript
26570326 26570983 41084 41741 - gene Npc2g coding_transcript
26571201 26572010 41959 42768 - gene Npc2h coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG11313[25347]::S000169_fly_pretag_fwd
ACACAAATGTTCTTTCTTACGAAACGTGGATCACGCAGAATATACGACCTgaagtgcataccaatcaggacccgc
fasta Fasta
CG11313[25347]::S000169_fly_pretag_rev
TTCCTTATTAAAATCTATTTATGCTTGTGTATGGAGAGAGCATAAACTTActtgtcgtcgtcatccttgtagtca
fasta Fasta