Clone: 03996259806504221 H02
Tagged gene: CG7888
Identifier: FBgn0036116
Clone | FlyFos026479(pRedFlp-Hgr)(CG7888[30858]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3L | ||||||||
11067871 | 11071836 | 11370 | 15335 | - | gene | CG7839 | coding_transcript | |
11066566 | 11067490 | 15716 | 16640 | + | gene | l(3)01239 | coding_transcript | |
11063683 | 11066448 | 16758 | 19523 | - | gene | Mocs1 | coding_transcript | |
11062143 | 11062953 | 20253 | 21063 | + | gene | CG6310 | coding_transcript | |
11058097 | 11062125 | 21081 | 25109 | - | gene | SuUR | coding_transcript | |
11055826 | 11058037 | 25169 | 27380 | + | gene | CG32075 | coding_transcript | |
11055231 | 11055714 | 27492 | 27975 | + | gene | CG32069 | coding_transcript | |
11054671 | 11055315 | 27891 | 28535 | - | gene | blos2 | coding_transcript | |
11052537 | 11054319 | 28887 | 30669 | + | gene | CG6321 | coding_transcript | |
11047137 | 11052759 | 30447 | 37131 | - | gene | CG7888 | coding_transcript | |
11047137 | 11052759 | 30447 | 37131 | - | mrna | FBtr0076199 | coding_transcript | |
11048641 | 11052759 | 30447 | 35627 | - | mrna | FBtr0076200 | coding_transcript | |
11050259 | 11052759 | 30447 | 34009 | - | mrna | FBtr0076201 | coding_transcript | |
11052259 | 11052759 | 30447 | 32009 | - | exon | coding_transcript | ||
11052259 | 11052759 | 30447 | 32009 | - | exon | coding_transcript | ||
11052259 | 11052759 | 30447 | 32009 | - | exon | coding_transcript | ||
11052351 | 11052759 | 30447 | 30855 | - | three_prime_utr | coding_transcript | ||
11052351 | 11052759 | 30447 | 30855 | - | three_prime_utr | coding_transcript | ||
11052351 | 11052759 | 30447 | 30855 | - | three_prime_utr | coding_transcript | ||
11052259 | 11052350 | 30856 | 32009 | - | cds | coding_transcript | ||
11052259 | 11052350 | 30856 | 32009 | - | cds | coding_transcript | ||
11052259 | 11052350 | 30856 | 32009 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 30932 | 30965 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 30973 | 31044 | - | cds | BLRP | CLC | |
2337 | 2357 | 31045 | 31065 | - | cds | TEV | CLC | |
2313 | 2336 | 31066 | 31089 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 31090 | 31131 | - | cds | V5 | CLC | |
1548 | 2264 | 31138 | 31854 | - | cds | SGFP | CLC | |
1482 | 1541 | 31861 | 31920 | - | cds | 2xTY1 | CLC | |
dmel-5.43-3L | ||||||||
11052201 | 11052258 | 32010 | 32067 | - | intron | coding_transcript | ||
11052201 | 11052258 | 32010 | 32067 | - | intron | coding_transcript | ||
11052201 | 11052258 | 32010 | 32067 | - | intron | coding_transcript | ||
11052045 | 11052200 | 32068 | 32223 | - | exon | coding_transcript | ||
11052045 | 11052200 | 32068 | 32223 | - | cds | coding_transcript | ||
11052045 | 11052200 | 32068 | 32223 | - | exon | coding_transcript | ||
11052045 | 11052200 | 32068 | 32223 | - | cds | coding_transcript | ||
11052045 | 11052200 | 32068 | 32223 | - | exon | coding_transcript | ||
11052045 | 11052200 | 32068 | 32223 | - | cds | coding_transcript | ||
11051977 | 11052044 | 32224 | 32291 | - | intron | coding_transcript | ||
11051977 | 11052044 | 32224 | 32291 | - | intron | coding_transcript | ||
11051977 | 11052044 | 32224 | 32291 | - | intron | coding_transcript | ||
11051801 | 11051976 | 32292 | 32467 | - | exon | coding_transcript | ||
11051801 | 11051976 | 32292 | 32467 | - | cds | coding_transcript | ||
11051801 | 11051976 | 32292 | 32467 | - | exon | coding_transcript | ||
11051801 | 11051976 | 32292 | 32467 | - | cds | coding_transcript | ||
11051801 | 11051976 | 32292 | 32467 | - | exon | coding_transcript | ||
11051801 | 11051976 | 32292 | 32467 | - | cds | coding_transcript | ||
11051741 | 11051800 | 32468 | 32527 | - | intron | coding_transcript | ||
11051741 | 11051800 | 32468 | 32527 | - | intron | coding_transcript | ||
11051741 | 11051800 | 32468 | 32527 | - | intron | coding_transcript | ||
11051115 | 11051740 | 32528 | 33153 | - | exon | coding_transcript | ||
11051115 | 11051740 | 32528 | 33153 | - | cds | coding_transcript | ||
11051115 | 11051740 | 32528 | 33153 | - | exon | coding_transcript | ||
11051115 | 11051740 | 32528 | 33153 | - | cds | coding_transcript | ||
11051115 | 11051740 | 32528 | 33153 | - | exon | coding_transcript | ||
11051115 | 11051740 | 32528 | 33153 | - | cds | coding_transcript | ||
11051053 | 11051114 | 33154 | 33215 | - | intron | coding_transcript | ||
11051053 | 11051114 | 33154 | 33215 | - | intron | coding_transcript | ||
11051053 | 11051114 | 33154 | 33215 | - | intron | coding_transcript | ||
11050866 | 11051052 | 33216 | 33402 | - | exon | coding_transcript | ||
11050866 | 11051052 | 33216 | 33402 | - | cds | coding_transcript | ||
11050866 | 11051052 | 33216 | 33402 | - | exon | coding_transcript | ||
11050866 | 11051052 | 33216 | 33402 | - | cds | coding_transcript | ||
11050866 | 11051052 | 33216 | 33402 | - | exon | coding_transcript | ||
11050866 | 11051052 | 33216 | 33402 | - | cds | coding_transcript | ||
11050808 | 11050865 | 33403 | 33460 | - | intron | coding_transcript | ||
11050808 | 11050865 | 33403 | 33460 | - | intron | coding_transcript | ||
11050808 | 11050865 | 33403 | 33460 | - | intron | coding_transcript | ||
11050654 | 11050807 | 33461 | 33614 | - | exon | coding_transcript | ||
11050654 | 11050807 | 33461 | 33614 | - | exon | coding_transcript | ||
11050654 | 11050807 | 33461 | 33614 | - | exon | coding_transcript | ||
11050654 | 11050807 | 33461 | 33614 | - | cds | coding_transcript | ||
11050656 | 11050807 | 33461 | 33612 | - | cds | coding_transcript | ||
11050656 | 11050807 | 33461 | 33612 | - | cds | coding_transcript | ||
11050654 | 11050655 | 33613 | 33614 | - | five_prime_utr | coding_transcript | ||
11050654 | 11050655 | 33613 | 33614 | - | five_prime_utr | coding_transcript | ||
11047460 | 11050653 | 33615 | 36808 | - | intron | coding_transcript | ||
11048954 | 11050653 | 33615 | 35314 | - | intron | coding_transcript | ||
11050286 | 11050653 | 33615 | 33982 | - | intron | coding_transcript | ||
11050259 | 11050285 | 33983 | 34009 | - | exon | coding_transcript | ||
11050279 | 11050285 | 33983 | 33989 | - | cds | coding_transcript | ||
11050259 | 11050278 | 33990 | 34009 | - | five_prime_utr | coding_transcript | ||
11048641 | 11048953 | 35315 | 35627 | - | exon | coding_transcript | ||
11048641 | 11048953 | 35315 | 35627 | - | five_prime_utr | coding_transcript | ||
11047137 | 11047459 | 36809 | 37131 | - | exon | coding_transcript | ||
11047137 | 11047459 | 36809 | 37131 | - | five_prime_utr | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG7888[30858]::S000169_fly_pretag_rev
TTGAATTGGAATGCCCGCTGGCGGATTTACGTCCTTGCATATGCAAACTActtgtcgtcgtcatccttgtagtca
|
Fasta |
CG7888[30858]::S000169_fly_pretag_fwd
TAATCGGCACGTATACCTCACTCAAGGAGATCGTACTAACCTTTTCGGAGgaagtgcataccaatcaggacccgc
|
Fasta |