Clone: 8900262712670307 G12

Tagged gene: Obp83cd
Identifier: FBgn0046878

Clone FlyFos026446(pRedFlp-Hgr)(Obp83cd[18188]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
1937392 1938019 15505 16132 + gene Obp83g coding_transcript
1935402 1936740 16784 18122 + gene Obp83ef coding_transcript
1933856 1935457 18067 20730 - gene Obp83cd coding_transcript
1933856 1935457 18067 20730 - mrna FBtr0078584 coding_transcript
1934991 1935457 18067 19595 - exon coding_transcript
1935339 1935457 18067 18185 - three_prime_utr coding_transcript
1934991 1935338 18186 19595 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 18262 18295 - misc_recomb FRT CLC
2358 2429 18303 18374 - cds BLRP CLC
2337 2357 18375 18395 - cds TEV CLC
2313 2336 18396 18419 - cds Precision cut site CLC
2271 2312 18420 18461 - cds V5 CLC
1548 2264 18468 19184 - cds SGFP CLC
1482 1541 19191 19250 - cds 2xTY1 CLC
dmel-5.43-3R
1934353 1934990 19596 20233 - intron coding_transcript
1934023 1934352 20234 20563 - exon coding_transcript
1934023 1934352 20234 20563 - cds coding_transcript
1933960 1934022 20564 20626 - intron coding_transcript
1933856 1933959 20627 20730 - exon coding_transcript
1933909 1933959 20627 20677 - cds coding_transcript
1933856 1933908 20678 20730 - five_prime_utr coding_transcript
1914951 1926609 27977 39635 + gene Gasp coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
Obp83cd[18188]::S000169_fly_pretag_fwd
ACCGATGTGCCACATATTACAAACAGTTCACCTGCTACGCGATGGCTGTTgaagtgcataccaatcaggacccgc
 fasta Fasta
Obp83cd[18188]::S000169_fly_pretag_rev
AAATTAGTATGTAATCATTTATAAATTTTGCTTACAATAATAGCTGCCTActtgtcgtcgtcatccttgtagtca
 fasta Fasta