Clone: 8900262712670307 C10

Explore vector in genome browser.

Export Fasta GenBank GFF

Validation(click to hide details)

Type	Status	Download / View
Grows in selection	good
NGS-based tag validation	bad

Genes in pFlyFos vector(click to hide details)

Gene		Clone relative			Genome relative
Name	Length	Start	End	Strand	Start	End	Strand
DsRed	716	8417	9132	+	8417	9132	+

Features(click to show details)

Start (Source)	End (Source)	Start	End	Strand	Type	Name	Source
pFlyFos
1	107	1	107	-	cds	LacZ	epicentre
4	21	4	21	-	primer_bind	CC2_rev	epicentre
310	593	310	593	+	misc_recomb	attB	epicentre
727	1386	727	1386	-	cds	Cat	epicentre
1605	1952	1605	1952	+	cds	redF	epicentre
2336	2953	2336	2953	+	rep_origin	oriV	epicentre
2953	3007	2953	3007	+	rep_origin	ori2	epicentre
3347	4102	3347	4102	+	cds	repE	epicentre
4681	5856	4681	5856	+	cds	parA	epicentre
5856	6827	5856	6827	+	cds	parB	epicentre
6900	7417	6900	7417	+	repeat_region	parC	epicentre
7633	8031	7633	8031	+	misc_binding	cos	epicentre
8049	8082	8049	8082	+	misc_recomb	loxP	epicentre
8182	8416	8182	8416	+	promoter	3xP3	epicentre
8417	9132	8417	9132	+	gene	DsRed	epicentre
8452	9132	8452	9132	+	cds	DsRed	epicentre
9284	9334	9284	9334	+	terminator	SV40	epicentre
9408	9630	9408	9630	-	cds	LacZ	epicentre
9559	9576	9559	9576	+	primer_bind	T7	epicentre
9610	9627	9610	9627	+	primer_bind	CC2_fwd	epicentre
dmel-5.43-X
20910541	20911632	12371	13462	-	gene	CG15449	coding_transcript
20913516	20915134	15346	18026	+	gene	Mgstl	coding_transcript
20913516	20915134	15346	18026	+	mrna	FBtr0077242	coding_transcript
20913516	20913674	15346	15504	+	exon		coding_transcript
20913516	20913545	15346	15375	+	five_prime_utr		coding_transcript
20913546	20913674	15376	15504	+	cds		coding_transcript
20913675	20914706	15505	16536	+	intron		coding_transcript
20914099	20915134	15929	18026	+	mrna	FBtr0077243	coding_transcript
20914099	20914328	15929	16158	+	exon		coding_transcript
20914099	20914196	15929	16026	+	five_prime_utr		coding_transcript
20914197	20914328	16027	16158	+	cds		coding_transcript
20914329	20914706	16159	16536	+	intron		coding_transcript
20914707	20915134	16537	18026	+	exon		coding_transcript
20914707	20915134	16537	18026	+	exon		coding_transcript
20914707	20915033	16537	17925	+	cds		coding_transcript
20914707	20915033	16537	17925	+	cds		coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482	1541	16861	16920	+	cds	2xTY1	CLC
1548	2264	16927	17643	+	cds	SGFP	CLC
2271	2312	17650	17691	+	cds	V5	CLC
2313	2336	17692	17715	+	cds	Precision cut site	CLC
2337	2357	17716	17736	+	cds	TEV	CLC
2358	2429	17737	17808	+	cds	BLRP	CLC
3813	3846	17816	17849	+	misc_recomb	FRT	CLC
dmel-5.43-X
20915034	20915134	17926	18026	+	three_prime_utr		coding_transcript
20915034	20915134	17926	18026	+	three_prime_utr		coding_transcript
20916165	20920127	19057	23019	+	gene	Cbs	coding_transcript
20920991	20925143	23883	28035	-	gene	CG1518	coding_transcript
20933411	20938560	36303	41452	-	gene	CG32512	coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence	Export
Mgstl[16860]::S000169_fly_pretag_fwd TGGGCGCCACCGTCTACATGGCCCTGCAGGTCATCGCCTCGGCCGCCTTCgaagtgcataccaatcaggacccgc	Fasta
Mgstl[16860]::S000169_fly_pretag_rev TTTCAAAATGCTTAAAAAAAAAAACAAGAAGGACTAGACCTATGTGCTCActtgtcgtcgtcatccttgtagtca	Fasta