Clone: 8900262712670307 H01

Tagged gene: CG5510
Identifier: FBgn0039160

Clone FlyFos026295(pRedFlp-Hgr)(CG5510[17927]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
19987512 19988939 11777 13204 + gene CG6182 coding_transcript
19988529 19989246 12794 13511 - gene mRpS24 coding_transcript
19989690 19994041 13955 19368 + gene Apc2 coding_transcript
19993395 19995283 17660 20610 - gene CG5510 coding_transcript
19993395 19995283 17660 20610 - mrna FBtr0084576 coding_transcript
19993395 19993866 17660 19193 - exon coding_transcript
19993395 19993659 17660 17924 - three_prime_utr coding_transcript
19993660 19993866 17925 19193 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 18001 18034 - misc_recomb FRT CLC
2358 2429 18042 18113 - cds BLRP CLC
2337 2357 18114 18134 - cds TEV CLC
2313 2336 18135 18158 - cds Precision cut site CLC
2271 2312 18159 18200 - cds V5 CLC
1548 2264 18207 18923 - cds SGFP CLC
1482 1541 18930 18989 - cds 2xTY1 CLC
dmel-5.43-3R
19993867 19994195 19194 19522 - intron coding_transcript
19994196 19994525 19523 19852 - exon coding_transcript
19994196 19994525 19523 19852 - cds coding_transcript
19994526 19994578 19853 19905 - intron coding_transcript
19994579 19994776 19906 20103 - exon coding_transcript
19994579 19994776 19906 20103 - cds coding_transcript
19994777 19994852 20104 20179 - intron coding_transcript
19994853 19994968 20180 20295 - exon coding_transcript
19994853 19994968 20180 20295 - cds coding_transcript
19994969 19995036 20296 20363 - intron coding_transcript
19995037 19995283 20364 20610 - exon coding_transcript
19995037 19995175 20364 20502 - cds coding_transcript
19995176 19995283 20503 20610 - five_prime_utr coding_transcript
19998353 20009752 23680 35079 + gene CG13606 coding_transcript
20012087 20013515 37414 38842 + gene CHORD coding_transcript
20013444 20014663 38771 39990 - gene CG5515 coding_transcript
20014770 20019145 40097 44472 - gene CG5524 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG5510[17927]::S000169_fly_pretag_rev
CGGGTAACTCCTAACATGATGCTACTGTGATGAACTAGCTAGAGAGCTCActtgtcgtcgtcatccttgtagtca
 fasta Fasta
CG5510[17927]::S000169_fly_pretag_fwd
TCTTCGCCATCTCCTACTTCAAGGATCGCAACGCGCGAAAACGTTTCTACgaagtgcataccaatcaggacccgc
 fasta Fasta