Clone: 14365767356821757 B11

Tagged gene: pallidin
Identifier: FBgn0036192

Clone FlyFos025906(pRedFlp-Hgr)(pallidin[30567]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3L
11675126 11676905 22578 24357 + gene TfIIEalpha coding_transcript
11677084 11683255 24536 31769 + gene Sug coding_transcript
11682731 11684499 30183 33013 - gene pallidin coding_transcript
11682731 11684499 30183 33013 - mrna FBtr0300097 coding_transcript
11682731 11684499 30183 33013 - mrna FBtr0300726 coding_transcript
11682731 11684353 30183 32867 - mrna FBtr0300725 coding_transcript
11682731 11683208 30183 31722 - exon coding_transcript
11682731 11683208 30183 31722 - exon coding_transcript
11682731 11683208 30183 31722 - three_prime_utr coding_transcript
11682731 11683208 30183 31722 - exon coding_transcript
11682731 11683112 30183 30564 - three_prime_utr coding_transcript
11682731 11683112 30183 30564 - three_prime_utr coding_transcript
11683113 11683208 30565 31722 - cds coding_transcript
11683113 11683208 30565 31722 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 30641 30674 - misc_recomb FRT CLC
2358 2429 30682 30753 - cds BLRP CLC
2337 2357 30754 30774 - cds TEV CLC
2313 2336 30775 30798 - cds Precision cut site CLC
2271 2312 30799 30840 - cds V5 CLC
1548 2264 30847 31563 - cds SGFP CLC
1482 1541 31570 31629 - cds 2xTY1 CLC
dmel-5.43-3L
11683209 11683325 31723 31839 - intron coding_transcript
11683209 11683325 31723 31839 - intron coding_transcript
11683209 11683325 31723 31839 - intron coding_transcript
11683326 11683412 31840 31926 - exon coding_transcript
11683326 11683412 31840 31926 - cds coding_transcript
11683326 11683412 31840 31926 - exon coding_transcript
11683326 11683412 31840 31926 - three_prime_utr coding_transcript
11683326 11683412 31840 31926 - exon coding_transcript
11683326 11683412 31840 31926 - cds coding_transcript
11683413 11683996 31927 32510 - intron coding_transcript
11683413 11683996 31927 32510 - intron coding_transcript
11683413 11683996 31927 32510 - intron coding_transcript
11683997 11684349 32511 32863 - exon coding_transcript
11683997 11684135 32511 32649 - three_prime_utr coding_transcript
11683997 11684081 32511 32595 - exon coding_transcript
11683997 11684081 32511 32595 - cds coding_transcript
11683997 11684081 32511 32595 - exon coding_transcript
11683997 11684081 32511 32595 - cds coding_transcript
11684082 11684139 32596 32653 - intron coding_transcript
11684082 11684139 32596 32653 - intron coding_transcript
11684136 11684349 32650 32863 - cds coding_transcript
11684140 11684353 32654 32867 - exon coding_transcript
11684140 11684349 32654 32863 - exon coding_transcript
11684140 11684349 32654 32863 - cds coding_transcript
11684140 11684234 32654 32748 - cds coding_transcript
11684235 11684353 32749 32867 - five_prime_utr coding_transcript
11684350 11684407 32864 32921 - intron coding_transcript
11684350 11684407 32864 32921 - intron coding_transcript
11684408 11684499 32922 33013 - exon coding_transcript
11684408 11684499 32922 33013 - exon coding_transcript
11684408 11684433 32922 32947 - cds coding_transcript
11684408 11684433 32922 32947 - cds coding_transcript
11684434 11684499 32948 33013 - five_prime_utr coding_transcript
11684434 11684499 32948 33013 - five_prime_utr coding_transcript
11684747 11685857 33261 34371 + gene CG14135 coding_transcript
11686979 11690086 35493 38600 - gene CG11652 coding_transcript
11690226 11692363 38740 40877 - gene CG6053 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
pallidin[30567]::S000169_fly_pretag_fwd
AGCGGAAACTCGAGAGGCTACAGCACGAGGAGTCGCTCATTGGCAGCCAGgaagtgcataccaatcaggacccgc
fasta Fasta
pallidin[30567]::S000169_fly_pretag_rev
GAAGATTCCGGGAGACACCTGGTTAGGTGTTGACTGATCCCCTTCGTCTActtgtcgtcgtcatccttgtagtca
fasta Fasta