Clone: 14365767356821757 H09
Tagged gene: mod(r)
Identifier: FBgn0016038
Clone | FlyFos025891(pRedFlp-Hgr)(mod(r)[23382]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
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Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
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Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-X | ||||||||
504579 | 514228 | 11303 | 20952 | - | gene | CG13366 | coding_transcript | |
514748 | 515241 | 21472 | 21965 | - | gene | CG13365 | coding_transcript | |
515569 | 517081 | 22293 | 24867 | + | gene | mod(r) | coding_transcript | |
515569 | 517081 | 22293 | 24867 | + | mrna | FBtr0089724 | coding_transcript | |
515569 | 517081 | 22293 | 24867 | + | mrna | FBtr0089725 | coding_transcript | |
515569 | 517081 | 22293 | 24867 | + | mrna | FBtr0089726 | coding_transcript | |
515569 | 515830 | 22293 | 22554 | + | exon | coding_transcript | ||
515569 | 515830 | 22293 | 22554 | + | five_prime_utr | coding_transcript | ||
515569 | 515830 | 22293 | 22554 | + | exon | coding_transcript | ||
515569 | 515830 | 22293 | 22554 | + | five_prime_utr | coding_transcript | ||
515569 | 515830 | 22293 | 22554 | + | exon | coding_transcript | ||
515569 | 515830 | 22293 | 22554 | + | five_prime_utr | coding_transcript | ||
515831 | 515885 | 22555 | 22609 | + | intron | coding_transcript | ||
515831 | 515874 | 22555 | 22598 | + | intron | coding_transcript | ||
515831 | 515874 | 22555 | 22598 | + | intron | coding_transcript | ||
515839 | 516966 | 22563 | 24752 | + | mrna | FBtr0089723 | coding_transcript | |
515839 | 516179 | 22563 | 22903 | + | exon | coding_transcript | ||
515839 | 515923 | 22563 | 22647 | + | five_prime_utr | coding_transcript | ||
515875 | 516179 | 22599 | 22903 | + | exon | coding_transcript | ||
515875 | 516179 | 22599 | 22903 | + | exon | coding_transcript | ||
515875 | 515923 | 22599 | 22647 | + | five_prime_utr | coding_transcript | ||
515875 | 515923 | 22599 | 22647 | + | five_prime_utr | coding_transcript | ||
515886 | 516179 | 22610 | 22903 | + | exon | coding_transcript | ||
515886 | 515923 | 22610 | 22647 | + | five_prime_utr | coding_transcript | ||
515924 | 516179 | 22648 | 22903 | + | cds | coding_transcript | ||
515924 | 516179 | 22648 | 22903 | + | cds | coding_transcript | ||
515924 | 516179 | 22648 | 22903 | + | cds | coding_transcript | ||
515924 | 516179 | 22648 | 22903 | + | cds | coding_transcript | ||
516180 | 516239 | 22904 | 22963 | + | intron | coding_transcript | ||
516180 | 516239 | 22904 | 22963 | + | intron | coding_transcript | ||
516180 | 516239 | 22904 | 22963 | + | intron | coding_transcript | ||
516180 | 516239 | 22904 | 22963 | + | intron | coding_transcript | ||
516240 | 516391 | 22964 | 23115 | + | exon | coding_transcript | ||
516240 | 516391 | 22964 | 23115 | + | cds | coding_transcript | ||
516240 | 516391 | 22964 | 23115 | + | exon | coding_transcript | ||
516240 | 516391 | 22964 | 23115 | + | cds | coding_transcript | ||
516240 | 516391 | 22964 | 23115 | + | exon | coding_transcript | ||
516240 | 516391 | 22964 | 23115 | + | cds | coding_transcript | ||
516240 | 516391 | 22964 | 23115 | + | exon | coding_transcript | ||
516240 | 516391 | 22964 | 23115 | + | cds | coding_transcript | ||
516392 | 516478 | 23116 | 23202 | + | intron | coding_transcript | ||
516392 | 516478 | 23116 | 23202 | + | intron | coding_transcript | ||
516392 | 516466 | 23116 | 23190 | + | intron | coding_transcript | ||
516392 | 516466 | 23116 | 23190 | + | intron | coding_transcript | ||
516467 | 517081 | 23191 | 24867 | + | exon | coding_transcript | ||
516467 | 517081 | 23191 | 24867 | + | exon | coding_transcript | ||
516467 | 516661 | 23191 | 24447 | + | cds | coding_transcript | ||
516467 | 516661 | 23191 | 24447 | + | cds | coding_transcript | ||
516479 | 517081 | 23203 | 24867 | + | exon | coding_transcript | ||
516479 | 516966 | 23203 | 24752 | + | exon | coding_transcript | ||
516479 | 516661 | 23203 | 24447 | + | cds | coding_transcript | ||
516479 | 516661 | 23203 | 24447 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 23383 | 23442 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 23449 | 24165 | + | cds | SGFP | CLC | |
2271 | 2312 | 24172 | 24213 | + | cds | V5 | CLC | |
2313 | 2336 | 24214 | 24237 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 24238 | 24258 | + | cds | TEV | CLC | |
2358 | 2429 | 24259 | 24330 | + | cds | BLRP | CLC | |
3813 | 3846 | 24338 | 24371 | + | misc_recomb | FRT | CLC | |
dmel-5.43-X | ||||||||
516662 | 517081 | 24448 | 24867 | + | three_prime_utr | coding_transcript | ||
516662 | 517081 | 24448 | 24867 | + | three_prime_utr | coding_transcript | ||
516662 | 517081 | 24448 | 24867 | + | three_prime_utr | coding_transcript | ||
516662 | 516966 | 24448 | 24752 | + | three_prime_utr | coding_transcript | ||
517500 | 518798 | 25286 | 26584 | + | gene | CG13369 | coding_transcript | |
518791 | 519234 | 26577 | 27020 | - | gene | CG13364 | coding_transcript | |
519588 | 522052 | 27374 | 29838 | + | gene | CG17829 | coding_transcript | |
522350 | 523495 | 30136 | 31281 | - | gene | RpL36 | coding_transcript | |
523816 | 527666 | 31602 | 35452 | + | gene | l(1)1Bi | coding_transcript | |
527553 | 529760 | 35339 | 37546 | - | gene | Dredd | coding_transcript | |
529920 | 537793 | 37706 | 45579 | + | gene | su(s) | coding_transcript | |
538794 | 540419 | 46580 | 48205 | + | gene | CG13367 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
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mod(r)[23382]::S000169_fly_pretag_rev
GGAGGACCGTGCTCTGGATGGCACGGCCAGGGAGTGTCACGGCAATCCTActtgtcgtcgtcatccttgtagtca
|
Fasta |
mod(r)[23382]::S000169_fly_pretag_fwd
AAGAGGAGCGCCTGGGCACCCAGCTCAGTGCTCTGGAGCGGGCCGGTATCgaagtgcataccaatcaggacccgc
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Fasta |