Clone: 14365767356821757 F09
Tagged gene: RpL36
Identifier: FBgn0002579
Clone | FlyFos025891(pRedFlp-Hgr)(RpL36[29221]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
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Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-X | ||||||||
504579 | 514228 | 11303 | 20952 | - | gene | CG13366 | coding_transcript | |
514748 | 515241 | 21472 | 21965 | - | gene | CG13365 | coding_transcript | |
515569 | 517081 | 22293 | 23805 | + | gene | mod(r) | coding_transcript | |
517500 | 518798 | 24224 | 25522 | + | gene | CG13369 | coding_transcript | |
518791 | 519234 | 25515 | 25958 | - | gene | CG13364 | coding_transcript | |
519588 | 522052 | 26312 | 28776 | + | gene | CG17829 | coding_transcript | |
522350 | 523495 | 29074 | 31281 | - | gene | RpL36 | coding_transcript | |
522350 | 523495 | 29074 | 31281 | - | mrna | FBtr0070155 | coding_transcript | |
522350 | 523442 | 29074 | 31228 | - | mrna | FBtr0070156 | coding_transcript | |
522350 | 523440 | 29074 | 31226 | - | mrna | FBtr0070157 | coding_transcript | |
522350 | 523436 | 29074 | 31222 | - | mrna | FBtr0070158 | coding_transcript | |
522350 | 522719 | 29074 | 30505 | - | exon | coding_transcript | ||
522350 | 522719 | 29074 | 30505 | - | exon | coding_transcript | ||
522350 | 522719 | 29074 | 30505 | - | exon | coding_transcript | ||
522350 | 522719 | 29074 | 30505 | - | exon | coding_transcript | ||
522350 | 522494 | 29074 | 29218 | - | three_prime_utr | coding_transcript | ||
522350 | 522494 | 29074 | 29218 | - | three_prime_utr | coding_transcript | ||
522350 | 522494 | 29074 | 29218 | - | three_prime_utr | coding_transcript | ||
522350 | 522494 | 29074 | 29218 | - | three_prime_utr | coding_transcript | ||
522495 | 522719 | 29219 | 30505 | - | cds | coding_transcript | ||
522495 | 522719 | 29219 | 30505 | - | cds | coding_transcript | ||
522495 | 522719 | 29219 | 30505 | - | cds | coding_transcript | ||
522495 | 522719 | 29219 | 30505 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 29295 | 29328 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 29336 | 29407 | - | cds | BLRP | CLC | |
2337 | 2357 | 29408 | 29428 | - | cds | TEV | CLC | |
2313 | 2336 | 29429 | 29452 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 29453 | 29494 | - | cds | V5 | CLC | |
1548 | 2264 | 29501 | 30217 | - | cds | SGFP | CLC | |
1482 | 1541 | 30224 | 30283 | - | cds | 2xTY1 | CLC | |
dmel-5.43-X | ||||||||
522720 | 522783 | 30506 | 30569 | - | intron | coding_transcript | ||
522720 | 522783 | 30506 | 30569 | - | intron | coding_transcript | ||
522720 | 522783 | 30506 | 30569 | - | intron | coding_transcript | ||
522720 | 522783 | 30506 | 30569 | - | intron | coding_transcript | ||
522784 | 522911 | 30570 | 30697 | - | exon | coding_transcript | ||
522784 | 522911 | 30570 | 30697 | - | exon | coding_transcript | ||
522784 | 522911 | 30570 | 30697 | - | exon | coding_transcript | ||
522784 | 522911 | 30570 | 30697 | - | exon | coding_transcript | ||
522784 | 522906 | 30570 | 30692 | - | cds | coding_transcript | ||
522784 | 522906 | 30570 | 30692 | - | cds | coding_transcript | ||
522784 | 522906 | 30570 | 30692 | - | cds | coding_transcript | ||
522784 | 522906 | 30570 | 30692 | - | cds | coding_transcript | ||
522907 | 522911 | 30693 | 30697 | - | five_prime_utr | coding_transcript | ||
522907 | 522911 | 30693 | 30697 | - | five_prime_utr | coding_transcript | ||
522907 | 522911 | 30693 | 30697 | - | five_prime_utr | coding_transcript | ||
522907 | 522911 | 30693 | 30697 | - | five_prime_utr | coding_transcript | ||
522912 | 523414 | 30698 | 31200 | - | intron | coding_transcript | ||
522912 | 523389 | 30698 | 31175 | - | intron | coding_transcript | ||
522912 | 523360 | 30698 | 31146 | - | intron | coding_transcript | ||
522912 | 523323 | 30698 | 31109 | - | intron | coding_transcript | ||
523324 | 523436 | 31110 | 31222 | - | exon | coding_transcript | ||
523324 | 523436 | 31110 | 31222 | - | five_prime_utr | coding_transcript | ||
523361 | 523442 | 31147 | 31228 | - | exon | coding_transcript | ||
523361 | 523442 | 31147 | 31228 | - | five_prime_utr | coding_transcript | ||
523390 | 523440 | 31176 | 31226 | - | exon | coding_transcript | ||
523390 | 523440 | 31176 | 31226 | - | five_prime_utr | coding_transcript | ||
523415 | 523495 | 31201 | 31281 | - | exon | coding_transcript | ||
523415 | 523495 | 31201 | 31281 | - | five_prime_utr | coding_transcript | ||
523816 | 527666 | 31602 | 35452 | + | gene | l(1)1Bi | coding_transcript | |
527553 | 529760 | 35339 | 37546 | - | gene | Dredd | coding_transcript | |
529920 | 537793 | 37706 | 45579 | + | gene | su(s) | coding_transcript | |
538794 | 540419 | 46580 | 48205 | + | gene | CG13367 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
RpL36[29221]::S000169_fly_pretag_fwd
AGTTGTCCAACATCCTCACCCAGCTGAGGAAGGCCCAGACCCACGCCAAGgaagtgcataccaatcaggacccgc
|
Fasta |
RpL36[29221]::S000169_fly_pretag_rev
TCCAGGTTGCCTTCCGATGCCGAGATGTCGAATCAGATTCCGTCCGTTTActtgtcgtcgtcatccttgtagtca
|
Fasta |