Clone: 14365767356821757 H08
Tagged gene: CG9297
Identifier: FBgn0038181
Clone | FlyFos025890(pRedFlp-Hgr)(CG9297[23188]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3R | ||||||||
9608012 | 9611401 | 15833 | 19222 | - | gene | Dip-B | coding_transcript | |
9606714 | 9607808 | 19426 | 20520 | - | gene | CG9286 | coding_transcript | |
9605303 | 9606517 | 20717 | 21931 | - | gene | CG9288 | coding_transcript | |
9605303 | 9606517 | 20717 | 21931 | - | gene | CG42375 | coding_transcript | |
9597320 | 9605037 | 22197 | 30976 | - | gene | CG9297 | coding_transcript | |
9597320 | 9605037 | 22197 | 30976 | - | mrna | FBtr0082827 | coding_transcript | |
9597320 | 9605037 | 22197 | 30976 | - | mrna | FBtr0082828 | coding_transcript | |
9603632 | 9605037 | 22197 | 24664 | - | exon | coding_transcript | ||
9603632 | 9605037 | 22197 | 24664 | - | exon | coding_transcript | ||
9604049 | 9605037 | 22197 | 23185 | - | three_prime_utr | coding_transcript | ||
9604049 | 9605037 | 22197 | 23185 | - | three_prime_utr | coding_transcript | ||
9603632 | 9604048 | 23186 | 24664 | - | cds | coding_transcript | ||
9603632 | 9604048 | 23186 | 24664 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 23262 | 23295 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 23303 | 23374 | - | cds | BLRP | CLC | |
2337 | 2357 | 23375 | 23395 | - | cds | TEV | CLC | |
2313 | 2336 | 23396 | 23419 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 23420 | 23461 | - | cds | V5 | CLC | |
1548 | 2264 | 23468 | 24184 | - | cds | SGFP | CLC | |
1482 | 1541 | 24191 | 24250 | - | cds | 2xTY1 | CLC | |
dmel-5.43-3R | ||||||||
9603431 | 9603631 | 24665 | 24865 | - | intron | coding_transcript | ||
9603431 | 9603631 | 24665 | 24865 | - | intron | coding_transcript | ||
9602975 | 9603430 | 24866 | 25321 | - | exon | coding_transcript | ||
9602975 | 9603430 | 24866 | 25321 | - | cds | coding_transcript | ||
9602975 | 9603430 | 24866 | 25321 | - | exon | coding_transcript | ||
9602975 | 9603430 | 24866 | 25321 | - | cds | coding_transcript | ||
9602687 | 9602974 | 25322 | 25609 | - | intron | coding_transcript | ||
9602687 | 9602974 | 25322 | 25609 | - | intron | coding_transcript | ||
9602514 | 9602686 | 25610 | 25782 | - | exon | coding_transcript | ||
9602514 | 9602686 | 25610 | 25782 | - | cds | coding_transcript | ||
9602514 | 9602686 | 25610 | 25782 | - | exon | coding_transcript | ||
9602514 | 9602686 | 25610 | 25782 | - | cds | coding_transcript | ||
9602279 | 9602513 | 25783 | 26017 | - | intron | coding_transcript | ||
9602279 | 9602513 | 25783 | 26017 | - | intron | coding_transcript | ||
9601957 | 9602278 | 26018 | 26339 | - | exon | coding_transcript | ||
9601957 | 9602278 | 26018 | 26339 | - | cds | coding_transcript | ||
9601957 | 9602278 | 26018 | 26339 | - | exon | coding_transcript | ||
9601957 | 9602278 | 26018 | 26339 | - | cds | coding_transcript | ||
9601899 | 9601956 | 26340 | 26397 | - | intron | coding_transcript | ||
9601899 | 9601956 | 26340 | 26397 | - | intron | coding_transcript | ||
9601252 | 9601898 | 26398 | 27044 | - | exon | coding_transcript | ||
9601252 | 9601898 | 26398 | 27044 | - | cds | coding_transcript | ||
9601252 | 9601898 | 26398 | 27044 | - | exon | coding_transcript | ||
9601252 | 9601898 | 26398 | 27044 | - | cds | coding_transcript | ||
9601182 | 9601251 | 27045 | 27114 | - | intron | coding_transcript | ||
9601182 | 9601251 | 27045 | 27114 | - | intron | coding_transcript | ||
9601104 | 9601181 | 27115 | 27192 | - | exon | coding_transcript | ||
9601104 | 9601181 | 27115 | 27192 | - | cds | coding_transcript | ||
9601104 | 9601181 | 27115 | 27192 | - | exon | coding_transcript | ||
9601104 | 9601181 | 27115 | 27192 | - | cds | coding_transcript | ||
9601028 | 9601103 | 27193 | 27268 | - | intron | coding_transcript | ||
9601028 | 9601103 | 27193 | 27268 | - | intron | coding_transcript | ||
9600950 | 9601027 | 27269 | 27346 | - | exon | coding_transcript | ||
9600950 | 9601027 | 27269 | 27346 | - | cds | coding_transcript | ||
9600950 | 9601027 | 27269 | 27346 | - | exon | coding_transcript | ||
9600950 | 9601027 | 27269 | 27346 | - | cds | coding_transcript | ||
9600892 | 9600949 | 27347 | 27404 | - | intron | coding_transcript | ||
9600892 | 9600949 | 27347 | 27404 | - | intron | coding_transcript | ||
9600814 | 9600891 | 27405 | 27482 | - | exon | coding_transcript | ||
9600814 | 9600891 | 27405 | 27482 | - | cds | coding_transcript | ||
9600814 | 9600891 | 27405 | 27482 | - | exon | coding_transcript | ||
9600814 | 9600891 | 27405 | 27482 | - | cds | coding_transcript | ||
9600560 | 9600813 | 27483 | 27736 | - | intron | coding_transcript | ||
9600560 | 9600813 | 27483 | 27736 | - | intron | coding_transcript | ||
9600521 | 9600559 | 27737 | 27775 | - | exon | coding_transcript | ||
9600521 | 9600559 | 27737 | 27775 | - | cds | coding_transcript | ||
9600521 | 9600559 | 27737 | 27775 | - | exon | coding_transcript | ||
9600521 | 9600559 | 27737 | 27775 | - | cds | coding_transcript | ||
9600460 | 9600520 | 27776 | 27836 | - | intron | coding_transcript | ||
9600460 | 9600520 | 27776 | 27836 | - | intron | coding_transcript | ||
9600034 | 9600459 | 27837 | 28262 | - | exon | coding_transcript | ||
9600034 | 9600459 | 27837 | 28262 | - | cds | coding_transcript | ||
9600175 | 9600459 | 27837 | 28121 | - | exon | coding_transcript | ||
9600175 | 9600459 | 27837 | 28121 | - | cds | coding_transcript | ||
9600109 | 9600174 | 28122 | 28187 | - | intron | coding_transcript | ||
9600034 | 9600108 | 28188 | 28262 | - | exon | coding_transcript | ||
9600034 | 9600108 | 28188 | 28262 | - | cds | coding_transcript | ||
9599741 | 9600033 | 28263 | 28555 | - | intron | coding_transcript | ||
9599741 | 9600033 | 28263 | 28555 | - | intron | coding_transcript | ||
9599657 | 9599740 | 28556 | 28639 | - | exon | coding_transcript | ||
9599657 | 9599740 | 28556 | 28639 | - | cds | coding_transcript | ||
9599657 | 9599740 | 28556 | 28639 | - | exon | coding_transcript | ||
9599657 | 9599740 | 28556 | 28639 | - | cds | coding_transcript | ||
9598133 | 9599656 | 28640 | 30163 | - | intron | coding_transcript | ||
9598133 | 9599656 | 28640 | 30163 | - | intron | coding_transcript | ||
9597894 | 9598132 | 30164 | 30402 | - | exon | coding_transcript | ||
9597894 | 9598132 | 30164 | 30402 | - | exon | coding_transcript | ||
9598072 | 9598132 | 30164 | 30224 | - | cds | coding_transcript | ||
9598072 | 9598132 | 30164 | 30224 | - | cds | coding_transcript | ||
9597894 | 9598071 | 30225 | 30402 | - | five_prime_utr | coding_transcript | ||
9597894 | 9598071 | 30225 | 30402 | - | five_prime_utr | coding_transcript | ||
9597372 | 9597893 | 30403 | 30924 | - | intron | coding_transcript | ||
9597372 | 9597893 | 30403 | 30924 | - | intron | coding_transcript | ||
9597320 | 9597371 | 30925 | 30976 | - | exon | coding_transcript | ||
9597320 | 9597371 | 30925 | 30976 | - | five_prime_utr | coding_transcript | ||
9597320 | 9597371 | 30925 | 30976 | - | exon | coding_transcript | ||
9597320 | 9597371 | 30925 | 30976 | - | five_prime_utr | coding_transcript | ||
9593273 | 9596454 | 31842 | 35023 | - | gene | Cht5 | coding_transcript | |
9591497 | 9592829 | 35467 | 36799 | - | gene | CG9312 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
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CG9297[23188]::S000169_fly_pretag_rev
AAAACAAACTAAATGGCAGGTTTTCTCCTCTGGGAGGAGCCAACACCTCActtgtcgtcgtcatccttgtagtca
|
Fasta |
CG9297[23188]::S000169_fly_pretag_fwd
CCCAACAGCAGGATGGAACCATAGGCCAGGCCGAGCCTAAGAGGACGAGTgaagtgcataccaatcaggacccgc
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Fasta |