Clone: 14365767356821757 F07

Tagged gene: pcx
Identifier: FBgn0003048

Clone FlyFos025866(pRedFlp-Hgr)(pcx[18703]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-X
2131956 2136071 13258 17373 + gene kz coding_transcript
2119744 2132089 17240 30647 - gene pcx coding_transcript
2119744 2132089 17240 30647 - mrna FBtr0070395 coding_transcript
2129612 2132089 17240 20779 - exon coding_transcript
2130629 2132089 17240 18700 - three_prime_utr coding_transcript
2129612 2130628 18701 20779 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 18777 18810 - misc_recomb FRT CLC
2358 2429 18818 18889 - cds BLRP CLC
2337 2357 18890 18910 - cds TEV CLC
2313 2336 18911 18934 - cds Precision cut site CLC
2271 2312 18935 18976 - cds V5 CLC
1548 2264 18983 19699 - cds SGFP CLC
1482 1541 19706 19765 - cds 2xTY1 CLC
dmel-5.43-X
2129549 2129611 20780 20842 - intron coding_transcript
2127116 2129548 20843 23275 - exon coding_transcript
2127116 2129548 20843 23275 - cds coding_transcript
2127060 2127115 23276 23331 - intron coding_transcript
2126253 2127059 23332 24138 - exon coding_transcript
2126253 2127059 23332 24138 - cds coding_transcript
2126192 2126252 24139 24199 - intron coding_transcript
2126031 2126191 24200 24360 - exon coding_transcript
2126031 2126191 24200 24360 - cds coding_transcript
2125881 2126030 24361 24510 - intron coding_transcript
2124423 2125880 24511 25968 - exon coding_transcript
2124423 2125880 24511 25968 - cds coding_transcript
2124367 2124422 25969 26024 - intron coding_transcript
2121355 2124366 26025 29036 - exon coding_transcript
2121355 2124366 26025 29036 - cds coding_transcript
2121266 2121354 29037 29125 - intron coding_transcript
2120315 2121265 29126 30076 - exon coding_transcript
2120315 2121265 29126 30076 - cds coding_transcript
2120261 2120314 30077 30130 - intron coding_transcript
2119951 2120260 30131 30440 - exon coding_transcript
2119951 2120260 30131 30440 - cds coding_transcript
2119897 2119950 30441 30494 - intron coding_transcript
2119744 2119896 30495 30647 - exon coding_transcript
2119744 2119896 30495 30647 - cds coding_transcript
2117884 2118698 31693 32507 - gene CG14052 coding_transcript
2108319 2116492 33899 42072 + gene Vinc coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
pcx[18703]::S000169_fly_pretag_rev
CATTGGGGTGTTTGCTTGGCAAACAAATGCAAATATATGTGATCTACTTActtgtcgtcgtcatccttgtagtca
fasta Fasta
pcx[18703]::S000169_fly_pretag_fwd
AGGAGTCACCAAGCGATGAGAATGGCGAGAGCGAGGCGGGAACAACGGTCgaagtgcataccaatcaggacccgc
fasta Fasta