Clone: 14365767356821757 G06
Tagged gene: RpS21
Identifier: FBgn0015521
Clone | FlyFos025860(pRedFlp-Hgr)(RpS21[24921]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2L | ||||||||
2869652 | 2870649 | 10910 | 11907 | - | gene | CG8813 | coding_transcript | |
2857159 | 2868553 | 13006 | 24400 | - | gene | CG2991 | coding_transcript | |
2856070 | 2857041 | 24518 | 26551 | - | gene | RpS21 | coding_transcript | |
2856070 | 2857041 | 24518 | 26551 | - | mrna | FBtr0077623 | coding_transcript | |
2856769 | 2857041 | 24518 | 24790 | - | exon | coding_transcript | ||
2856769 | 2857041 | 24518 | 24790 | - | three_prime_utr | coding_transcript | ||
2856673 | 2856768 | 24791 | 24886 | - | intron | coding_transcript | ||
2856070 | 2856705 | 24854 | 26551 | - | mrna | FBtr0077621 | coding_transcript | |
2856070 | 2856705 | 24854 | 26551 | - | mrna | FBtr0273293 | coding_transcript | |
2856377 | 2856705 | 24854 | 26244 | - | exon | coding_transcript | ||
2856573 | 2856705 | 24854 | 26048 | - | three_prime_utr | coding_transcript | ||
2856631 | 2856705 | 24854 | 25990 | - | exon | coding_transcript | ||
2856641 | 2856705 | 24854 | 24918 | - | three_prime_utr | coding_transcript | ||
2856631 | 2856672 | 24887 | 25990 | - | exon | coding_transcript | ||
2856641 | 2856672 | 24887 | 24918 | - | three_prime_utr | coding_transcript | ||
2856631 | 2856640 | 24919 | 25990 | - | cds | coding_transcript | ||
2856631 | 2856640 | 24919 | 25990 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 24995 | 25028 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 25036 | 25107 | - | cds | BLRP | CLC | |
2337 | 2357 | 25108 | 25128 | - | cds | TEV | CLC | |
2313 | 2336 | 25129 | 25152 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 25153 | 25194 | - | cds | V5 | CLC | |
1548 | 2264 | 25201 | 25917 | - | cds | SGFP | CLC | |
1482 | 1541 | 25924 | 25983 | - | cds | 2xTY1 | CLC | |
dmel-5.43-2L | ||||||||
2856569 | 2856630 | 25991 | 26052 | - | intron | coding_transcript | ||
2856569 | 2856630 | 25991 | 26052 | - | intron | coding_transcript | ||
2856377 | 2856572 | 26049 | 26244 | - | cds | coding_transcript | ||
2856377 | 2856568 | 26053 | 26244 | - | exon | coding_transcript | ||
2856377 | 2856568 | 26053 | 26244 | - | cds | coding_transcript | ||
2856377 | 2856568 | 26053 | 26244 | - | exon | coding_transcript | ||
2856377 | 2856568 | 26053 | 26244 | - | cds | coding_transcript | ||
2856306 | 2856376 | 26245 | 26315 | - | intron | coding_transcript | ||
2856306 | 2856376 | 26245 | 26315 | - | intron | coding_transcript | ||
2856306 | 2856376 | 26245 | 26315 | - | intron | coding_transcript | ||
2856247 | 2856305 | 26316 | 26374 | - | exon | coding_transcript | ||
2856247 | 2856305 | 26316 | 26374 | - | exon | coding_transcript | ||
2856247 | 2856305 | 26316 | 26374 | - | exon | coding_transcript | ||
2856256 | 2856305 | 26316 | 26365 | - | cds | coding_transcript | ||
2856256 | 2856305 | 26316 | 26365 | - | cds | coding_transcript | ||
2856256 | 2856305 | 26316 | 26365 | - | cds | coding_transcript | ||
2856247 | 2856255 | 26366 | 26374 | - | five_prime_utr | coding_transcript | ||
2856247 | 2856255 | 26366 | 26374 | - | five_prime_utr | coding_transcript | ||
2856247 | 2856255 | 26366 | 26374 | - | five_prime_utr | coding_transcript | ||
2856176 | 2856246 | 26375 | 26445 | - | intron | coding_transcript | ||
2856176 | 2856246 | 26375 | 26445 | - | intron | coding_transcript | ||
2856176 | 2856246 | 26375 | 26445 | - | intron | coding_transcript | ||
2856070 | 2856175 | 26446 | 26551 | - | exon | coding_transcript | ||
2856070 | 2856175 | 26446 | 26551 | - | five_prime_utr | coding_transcript | ||
2856070 | 2856175 | 26446 | 26551 | - | exon | coding_transcript | ||
2856070 | 2856175 | 26446 | 26551 | - | five_prime_utr | coding_transcript | ||
2856070 | 2856175 | 26446 | 26551 | - | exon | coding_transcript | ||
2856070 | 2856175 | 26446 | 26551 | - | five_prime_utr | coding_transcript | ||
2849732 | 2855749 | 26872 | 32889 | + | gene | CG3104 | coding_transcript | |
2847632 | 2848997 | 33624 | 34989 | - | gene | CG2983 | coding_transcript | |
2846084 | 2847197 | 35424 | 36537 | + | gene | CG3117 | coding_transcript | |
2844601 | 2845711 | 36910 | 38020 | + | gene | CG18557 | coding_transcript | |
2842589 | 2844513 | 38108 | 40032 | + | gene | CG18558 | coding_transcript | |
2840124 | 2842638 | 39983 | 42497 | - | gene | CG2975 | coding_transcript | |
2838414 | 2839547 | 43074 | 44207 | - | gene | Cpr23B | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
RpS21[24921]::S000169_fly_pretag_rev
AAATCGCTTTATTACCAAATCAAAATCTAGCTATGGGTACGCCACGCTTActtgtcgtcgtcatccttgtagtca
|
Fasta |
RpS21[24921]::S000169_fly_pretag_fwd
CCCGGGATGGACATCCACTAATCGCGCATTTTTCGCCTTGCAGGAACTTCgaagtgcataccaatcaggacccgc
|
Fasta |