Clone: 14365767356821757 C04

Tagged gene: CG42559
Identifier: FBgn0260761

Clone FlyFos025815(pRedFlp-Hgr)(CG42559[25654]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2R
19487046 19488310 25117 27443 - gene CG42560 coding_transcript
19487051 19488310 25122 27443 - mrna FBtr0301262 coding_transcript
19487051 19488310 25122 27443 - gene CG42559 coding_transcript
19487051 19488310 25122 27443 - mrna FBtr0301258 coding_transcript
19487051 19488310 25122 27443 - mrna FBtr0301259 coding_transcript
19487051 19488310 25122 27443 - mrna FBtr0301260 coding_transcript
19487051 19487343 25122 25414 - exon coding_transcript
19487051 19487343 25122 25414 - three_prime_utr coding_transcript
19487051 19487217 25122 25288 - exon coding_transcript
19487051 19487217 25122 25288 - exon coding_transcript
19487051 19487217 25122 25288 - three_prime_utr coding_transcript
19487051 19487217 25122 25288 - exon coding_transcript
19487051 19487217 25122 25288 - three_prime_utr coding_transcript
19487051 19487070 25122 25141 - three_prime_utr coding_transcript
19487071 19487217 25142 25288 - cds coding_transcript
19487071 19487217 25142 25288 - cds coding_transcript
19487218 19487279 25289 25350 - intron coding_transcript
19487218 19487279 25289 25350 - intron coding_transcript
19487218 19487279 25289 25350 - intron coding_transcript
19487218 19487279 25289 25350 - intron coding_transcript
19487280 19487479 25351 25550 - exon coding_transcript
19487280 19487479 25351 25550 - three_prime_utr coding_transcript
19487280 19487343 25351 25414 - exon coding_transcript
19487280 19487343 25351 25414 - cds coding_transcript
19487280 19487343 25351 25414 - exon coding_transcript
19487280 19487343 25351 25414 - cds coding_transcript
19487280 19487343 25351 25414 - exon coding_transcript
19487280 19487343 25351 25414 - three_prime_utr coding_transcript
19487344 19487402 25415 25473 - intron coding_transcript
19487344 19487402 25415 25473 - intron coding_transcript
19487344 19487402 25415 25473 - intron coding_transcript
19487344 19487402 25415 25473 - intron coding_transcript
19487403 19487508 25474 25579 - exon coding_transcript
19487403 19487479 25474 25550 - exon coding_transcript
19487403 19487479 25474 25550 - exon coding_transcript
19487403 19487479 25474 25550 - three_prime_utr coding_transcript
19487403 19487479 25474 25550 - exon coding_transcript
19487403 19487479 25474 25550 - three_prime_utr coding_transcript
19487403 19487473 25474 25544 - cds coding_transcript
19487403 19487473 25474 25544 - cds coding_transcript
19487417 19488310 25488 27443 - mrna FBtr0301261 coding_transcript
19487417 19487507 25488 25578 - exon coding_transcript
19487417 19487507 25488 25578 - three_prime_utr coding_transcript
19487474 19487508 25545 25579 - five_prime_utr coding_transcript
19487474 19487479 25545 25550 - five_prime_utr coding_transcript
19487480 19487569 25551 25640 - intron coding_transcript
19487480 19487569 25551 25640 - intron coding_transcript
19487480 19487569 25551 25640 - intron coding_transcript
19487480 19487569 25551 25640 - intron coding_transcript
19487508 19487569 25579 25640 - intron coding_transcript
19487570 19487778 25641 26911 - exon coding_transcript
19487570 19487778 25641 26911 - five_prime_utr coding_transcript
19487570 19487778 25641 26911 - exon coding_transcript
19487570 19487778 25641 26911 - exon coding_transcript
19487570 19487778 25641 26911 - exon coding_transcript
19487570 19487778 25641 26911 - exon coding_transcript
19487570 19487580 25641 25651 - three_prime_utr coding_transcript
19487570 19487580 25641 25651 - three_prime_utr coding_transcript
19487570 19487580 25641 25651 - three_prime_utr coding_transcript
19487570 19487580 25641 25651 - three_prime_utr coding_transcript
19487581 19487778 25652 26911 - cds coding_transcript
19487581 19487778 25652 26911 - cds coding_transcript
19487581 19487778 25652 26911 - cds coding_transcript
19487581 19487778 25652 26911 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 25728 25761 - misc_recomb FRT CLC
2358 2429 25769 25840 - cds BLRP CLC
2337 2357 25841 25861 - cds TEV CLC
2313 2336 25862 25885 - cds Precision cut site CLC
2271 2312 25886 25927 - cds V5 CLC
1548 2264 25934 26650 - cds SGFP CLC
1482 1541 26657 26716 - cds 2xTY1 CLC
dmel-5.43-2R
19487779 19487836 26912 26969 - intron coding_transcript
19487779 19487836 26912 26969 - intron coding_transcript
19487779 19487836 26912 26969 - intron coding_transcript
19487779 19487836 26912 26969 - intron coding_transcript
19487779 19487836 26912 26969 - intron coding_transcript
19487837 19487903 26970 27036 - exon coding_transcript
19487837 19487903 26970 27036 - five_prime_utr coding_transcript
19487837 19487903 26970 27036 - exon coding_transcript
19487837 19487903 26970 27036 - cds coding_transcript
19487837 19487903 26970 27036 - exon coding_transcript
19487837 19487903 26970 27036 - cds coding_transcript
19487837 19487903 26970 27036 - exon coding_transcript
19487837 19487903 26970 27036 - cds coding_transcript
19487837 19487903 26970 27036 - exon coding_transcript
19487837 19487903 26970 27036 - cds coding_transcript
19487904 19487961 27037 27094 - intron coding_transcript
19487904 19487961 27037 27094 - intron coding_transcript
19487904 19487961 27037 27094 - intron coding_transcript
19487904 19487961 27037 27094 - intron coding_transcript
19487904 19487961 27037 27094 - intron coding_transcript
19487962 19488072 27095 27205 - exon coding_transcript
19487962 19488072 27095 27205 - five_prime_utr coding_transcript
19487962 19488072 27095 27205 - exon coding_transcript
19487962 19488072 27095 27205 - cds coding_transcript
19487962 19488072 27095 27205 - exon coding_transcript
19487962 19488072 27095 27205 - cds coding_transcript
19487962 19488072 27095 27205 - exon coding_transcript
19487962 19488072 27095 27205 - cds coding_transcript
19487962 19488072 27095 27205 - exon coding_transcript
19487962 19488072 27095 27205 - cds coding_transcript
19488073 19488127 27206 27260 - intron coding_transcript
19488073 19488127 27206 27260 - intron coding_transcript
19488073 19488127 27206 27260 - intron coding_transcript
19488073 19488127 27206 27260 - intron coding_transcript
19488073 19488127 27206 27260 - intron coding_transcript
19488128 19488310 27261 27443 - exon coding_transcript
19488128 19488310 27261 27443 - five_prime_utr coding_transcript
19488128 19488310 27261 27443 - exon coding_transcript
19488128 19488310 27261 27443 - exon coding_transcript
19488128 19488310 27261 27443 - exon coding_transcript
19488128 19488310 27261 27443 - exon coding_transcript
19488128 19488210 27261 27343 - cds coding_transcript
19488128 19488210 27261 27343 - cds coding_transcript
19488128 19488210 27261 27343 - cds coding_transcript
19488128 19488210 27261 27343 - cds coding_transcript
19488211 19488310 27344 27443 - five_prime_utr coding_transcript
19488211 19488310 27344 27443 - five_prime_utr coding_transcript
19488211 19488310 27344 27443 - five_prime_utr coding_transcript
19488211 19488310 27344 27443 - five_prime_utr coding_transcript
19488437 19489296 27570 28429 - gene IM18 coding_transcript
19488437 19489296 27570 28429 - gene CG10332 coding_transcript
19489504 19489979 28637 29112 - gene CG43209 coding_transcript
19490108 19491164 29241 30297 + gene CG5398 coding_transcript
19491249 19492676 30382 31809 - gene CG17664 coding_transcript
19493281 19494177 32414 33310 - gene CG17662 coding_transcript
19495115 19502269 34248 41402 - gene CG4019 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG42559[25654]::S000169_fly_pretag_fwd
TGAAAGCTCTGAAGGATTTGTTGGAGCAATTCAAAAAGAGTCTCGAAAAAgaagtgcataccaatcaggacccgc
fasta Fasta
CG42559[25654]::S000169_fly_pretag_rev
GGTGGAATATTGACAAACTTAAAAGTGATAGCCTACCGTTTGATAGGTCActtgtcgtcgtcatccttgtagtca
fasta Fasta