Clone: 14365767356821757 C04
Tagged gene: CG42559
Identifier: FBgn0260761
Clone | FlyFos025815(pRedFlp-Hgr)(CG42559[25654]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2R | ||||||||
19487046 | 19488310 | 25117 | 27443 | - | gene | CG42560 | coding_transcript | |
19487051 | 19488310 | 25122 | 27443 | - | mrna | FBtr0301262 | coding_transcript | |
19487051 | 19488310 | 25122 | 27443 | - | gene | CG42559 | coding_transcript | |
19487051 | 19488310 | 25122 | 27443 | - | mrna | FBtr0301258 | coding_transcript | |
19487051 | 19488310 | 25122 | 27443 | - | mrna | FBtr0301259 | coding_transcript | |
19487051 | 19488310 | 25122 | 27443 | - | mrna | FBtr0301260 | coding_transcript | |
19487051 | 19487343 | 25122 | 25414 | - | exon | coding_transcript | ||
19487051 | 19487343 | 25122 | 25414 | - | three_prime_utr | coding_transcript | ||
19487051 | 19487217 | 25122 | 25288 | - | exon | coding_transcript | ||
19487051 | 19487217 | 25122 | 25288 | - | exon | coding_transcript | ||
19487051 | 19487217 | 25122 | 25288 | - | three_prime_utr | coding_transcript | ||
19487051 | 19487217 | 25122 | 25288 | - | exon | coding_transcript | ||
19487051 | 19487217 | 25122 | 25288 | - | three_prime_utr | coding_transcript | ||
19487051 | 19487070 | 25122 | 25141 | - | three_prime_utr | coding_transcript | ||
19487071 | 19487217 | 25142 | 25288 | - | cds | coding_transcript | ||
19487071 | 19487217 | 25142 | 25288 | - | cds | coding_transcript | ||
19487218 | 19487279 | 25289 | 25350 | - | intron | coding_transcript | ||
19487218 | 19487279 | 25289 | 25350 | - | intron | coding_transcript | ||
19487218 | 19487279 | 25289 | 25350 | - | intron | coding_transcript | ||
19487218 | 19487279 | 25289 | 25350 | - | intron | coding_transcript | ||
19487280 | 19487479 | 25351 | 25550 | - | exon | coding_transcript | ||
19487280 | 19487479 | 25351 | 25550 | - | three_prime_utr | coding_transcript | ||
19487280 | 19487343 | 25351 | 25414 | - | exon | coding_transcript | ||
19487280 | 19487343 | 25351 | 25414 | - | cds | coding_transcript | ||
19487280 | 19487343 | 25351 | 25414 | - | exon | coding_transcript | ||
19487280 | 19487343 | 25351 | 25414 | - | cds | coding_transcript | ||
19487280 | 19487343 | 25351 | 25414 | - | exon | coding_transcript | ||
19487280 | 19487343 | 25351 | 25414 | - | three_prime_utr | coding_transcript | ||
19487344 | 19487402 | 25415 | 25473 | - | intron | coding_transcript | ||
19487344 | 19487402 | 25415 | 25473 | - | intron | coding_transcript | ||
19487344 | 19487402 | 25415 | 25473 | - | intron | coding_transcript | ||
19487344 | 19487402 | 25415 | 25473 | - | intron | coding_transcript | ||
19487403 | 19487508 | 25474 | 25579 | - | exon | coding_transcript | ||
19487403 | 19487479 | 25474 | 25550 | - | exon | coding_transcript | ||
19487403 | 19487479 | 25474 | 25550 | - | exon | coding_transcript | ||
19487403 | 19487479 | 25474 | 25550 | - | three_prime_utr | coding_transcript | ||
19487403 | 19487479 | 25474 | 25550 | - | exon | coding_transcript | ||
19487403 | 19487479 | 25474 | 25550 | - | three_prime_utr | coding_transcript | ||
19487403 | 19487473 | 25474 | 25544 | - | cds | coding_transcript | ||
19487403 | 19487473 | 25474 | 25544 | - | cds | coding_transcript | ||
19487417 | 19488310 | 25488 | 27443 | - | mrna | FBtr0301261 | coding_transcript | |
19487417 | 19487507 | 25488 | 25578 | - | exon | coding_transcript | ||
19487417 | 19487507 | 25488 | 25578 | - | three_prime_utr | coding_transcript | ||
19487474 | 19487508 | 25545 | 25579 | - | five_prime_utr | coding_transcript | ||
19487474 | 19487479 | 25545 | 25550 | - | five_prime_utr | coding_transcript | ||
19487480 | 19487569 | 25551 | 25640 | - | intron | coding_transcript | ||
19487480 | 19487569 | 25551 | 25640 | - | intron | coding_transcript | ||
19487480 | 19487569 | 25551 | 25640 | - | intron | coding_transcript | ||
19487480 | 19487569 | 25551 | 25640 | - | intron | coding_transcript | ||
19487508 | 19487569 | 25579 | 25640 | - | intron | coding_transcript | ||
19487570 | 19487778 | 25641 | 26911 | - | exon | coding_transcript | ||
19487570 | 19487778 | 25641 | 26911 | - | five_prime_utr | coding_transcript | ||
19487570 | 19487778 | 25641 | 26911 | - | exon | coding_transcript | ||
19487570 | 19487778 | 25641 | 26911 | - | exon | coding_transcript | ||
19487570 | 19487778 | 25641 | 26911 | - | exon | coding_transcript | ||
19487570 | 19487778 | 25641 | 26911 | - | exon | coding_transcript | ||
19487570 | 19487580 | 25641 | 25651 | - | three_prime_utr | coding_transcript | ||
19487570 | 19487580 | 25641 | 25651 | - | three_prime_utr | coding_transcript | ||
19487570 | 19487580 | 25641 | 25651 | - | three_prime_utr | coding_transcript | ||
19487570 | 19487580 | 25641 | 25651 | - | three_prime_utr | coding_transcript | ||
19487581 | 19487778 | 25652 | 26911 | - | cds | coding_transcript | ||
19487581 | 19487778 | 25652 | 26911 | - | cds | coding_transcript | ||
19487581 | 19487778 | 25652 | 26911 | - | cds | coding_transcript | ||
19487581 | 19487778 | 25652 | 26911 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 25728 | 25761 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 25769 | 25840 | - | cds | BLRP | CLC | |
2337 | 2357 | 25841 | 25861 | - | cds | TEV | CLC | |
2313 | 2336 | 25862 | 25885 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 25886 | 25927 | - | cds | V5 | CLC | |
1548 | 2264 | 25934 | 26650 | - | cds | SGFP | CLC | |
1482 | 1541 | 26657 | 26716 | - | cds | 2xTY1 | CLC | |
dmel-5.43-2R | ||||||||
19487779 | 19487836 | 26912 | 26969 | - | intron | coding_transcript | ||
19487779 | 19487836 | 26912 | 26969 | - | intron | coding_transcript | ||
19487779 | 19487836 | 26912 | 26969 | - | intron | coding_transcript | ||
19487779 | 19487836 | 26912 | 26969 | - | intron | coding_transcript | ||
19487779 | 19487836 | 26912 | 26969 | - | intron | coding_transcript | ||
19487837 | 19487903 | 26970 | 27036 | - | exon | coding_transcript | ||
19487837 | 19487903 | 26970 | 27036 | - | five_prime_utr | coding_transcript | ||
19487837 | 19487903 | 26970 | 27036 | - | exon | coding_transcript | ||
19487837 | 19487903 | 26970 | 27036 | - | cds | coding_transcript | ||
19487837 | 19487903 | 26970 | 27036 | - | exon | coding_transcript | ||
19487837 | 19487903 | 26970 | 27036 | - | cds | coding_transcript | ||
19487837 | 19487903 | 26970 | 27036 | - | exon | coding_transcript | ||
19487837 | 19487903 | 26970 | 27036 | - | cds | coding_transcript | ||
19487837 | 19487903 | 26970 | 27036 | - | exon | coding_transcript | ||
19487837 | 19487903 | 26970 | 27036 | - | cds | coding_transcript | ||
19487904 | 19487961 | 27037 | 27094 | - | intron | coding_transcript | ||
19487904 | 19487961 | 27037 | 27094 | - | intron | coding_transcript | ||
19487904 | 19487961 | 27037 | 27094 | - | intron | coding_transcript | ||
19487904 | 19487961 | 27037 | 27094 | - | intron | coding_transcript | ||
19487904 | 19487961 | 27037 | 27094 | - | intron | coding_transcript | ||
19487962 | 19488072 | 27095 | 27205 | - | exon | coding_transcript | ||
19487962 | 19488072 | 27095 | 27205 | - | five_prime_utr | coding_transcript | ||
19487962 | 19488072 | 27095 | 27205 | - | exon | coding_transcript | ||
19487962 | 19488072 | 27095 | 27205 | - | cds | coding_transcript | ||
19487962 | 19488072 | 27095 | 27205 | - | exon | coding_transcript | ||
19487962 | 19488072 | 27095 | 27205 | - | cds | coding_transcript | ||
19487962 | 19488072 | 27095 | 27205 | - | exon | coding_transcript | ||
19487962 | 19488072 | 27095 | 27205 | - | cds | coding_transcript | ||
19487962 | 19488072 | 27095 | 27205 | - | exon | coding_transcript | ||
19487962 | 19488072 | 27095 | 27205 | - | cds | coding_transcript | ||
19488073 | 19488127 | 27206 | 27260 | - | intron | coding_transcript | ||
19488073 | 19488127 | 27206 | 27260 | - | intron | coding_transcript | ||
19488073 | 19488127 | 27206 | 27260 | - | intron | coding_transcript | ||
19488073 | 19488127 | 27206 | 27260 | - | intron | coding_transcript | ||
19488073 | 19488127 | 27206 | 27260 | - | intron | coding_transcript | ||
19488128 | 19488310 | 27261 | 27443 | - | exon | coding_transcript | ||
19488128 | 19488310 | 27261 | 27443 | - | five_prime_utr | coding_transcript | ||
19488128 | 19488310 | 27261 | 27443 | - | exon | coding_transcript | ||
19488128 | 19488310 | 27261 | 27443 | - | exon | coding_transcript | ||
19488128 | 19488310 | 27261 | 27443 | - | exon | coding_transcript | ||
19488128 | 19488310 | 27261 | 27443 | - | exon | coding_transcript | ||
19488128 | 19488210 | 27261 | 27343 | - | cds | coding_transcript | ||
19488128 | 19488210 | 27261 | 27343 | - | cds | coding_transcript | ||
19488128 | 19488210 | 27261 | 27343 | - | cds | coding_transcript | ||
19488128 | 19488210 | 27261 | 27343 | - | cds | coding_transcript | ||
19488211 | 19488310 | 27344 | 27443 | - | five_prime_utr | coding_transcript | ||
19488211 | 19488310 | 27344 | 27443 | - | five_prime_utr | coding_transcript | ||
19488211 | 19488310 | 27344 | 27443 | - | five_prime_utr | coding_transcript | ||
19488211 | 19488310 | 27344 | 27443 | - | five_prime_utr | coding_transcript | ||
19488437 | 19489296 | 27570 | 28429 | - | gene | IM18 | coding_transcript | |
19488437 | 19489296 | 27570 | 28429 | - | gene | CG10332 | coding_transcript | |
19489504 | 19489979 | 28637 | 29112 | - | gene | CG43209 | coding_transcript | |
19490108 | 19491164 | 29241 | 30297 | + | gene | CG5398 | coding_transcript | |
19491249 | 19492676 | 30382 | 31809 | - | gene | CG17664 | coding_transcript | |
19493281 | 19494177 | 32414 | 33310 | - | gene | CG17662 | coding_transcript | |
19495115 | 19502269 | 34248 | 41402 | - | gene | CG4019 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG42559[25654]::S000169_fly_pretag_fwd
TGAAAGCTCTGAAGGATTTGTTGGAGCAATTCAAAAAGAGTCTCGAAAAAgaagtgcataccaatcaggacccgc
|
Fasta |
CG42559[25654]::S000169_fly_pretag_rev
GGTGGAATATTGACAAACTTAAAAGTGATAGCCTACCGTTTGATAGGTCActtgtcgtcgtcatccttgtagtca
|
Fasta |