Clone: 14365767356821757 H03

Tagged gene: CG5398
Identifier: FBgn0034882

Clone FlyFos025815(pRedFlp-Hgr)(CG5398[29143]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2R
19487046 19488310 25117 26381 - gene CG42560 coding_transcript
19487051 19488310 25122 26381 - gene CG42559 coding_transcript
19488437 19489296 26508 27367 - gene IM18 coding_transcript
19488437 19489296 26508 27367 - gene CG10332 coding_transcript
19489504 19489979 27575 28050 - gene CG43209 coding_transcript
19490108 19491164 28179 30297 + gene CG5398 coding_transcript
19490108 19491164 28179 30297 + mrna FBtr0072071 coding_transcript
19490108 19490367 28179 28438 + exon coding_transcript
19490108 19490239 28179 28310 + five_prime_utr coding_transcript
19490240 19490367 28311 28438 + cds coding_transcript
19490368 19490422 28439 28493 + intron coding_transcript
19490423 19490825 28494 28896 + exon coding_transcript
19490423 19490825 28494 28896 + cds coding_transcript
19490826 19490889 28897 28960 + intron coding_transcript
19490890 19491164 28961 30297 + exon coding_transcript
19490890 19491075 28961 30208 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 29144 29203 + cds 2xTY1 CLC
1548 2264 29210 29926 + cds SGFP CLC
2271 2312 29933 29974 + cds V5 CLC
2313 2336 29975 29998 + cds Precision cut site CLC
2337 2357 29999 30019 + cds TEV CLC
2358 2429 30020 30091 + cds BLRP CLC
3813 3846 30099 30132 + misc_recomb FRT CLC
dmel-5.43-2R
19491076 19491164 30209 30297 + three_prime_utr coding_transcript
19491249 19492676 30382 31809 - gene CG17664 coding_transcript
19493281 19494177 32414 33310 - gene CG17662 coding_transcript
19495115 19502269 34248 41402 - gene CG4019 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG5398[29143]::S000169_fly_pretag_rev
AGCCACACGGTAGCCAAAAACGTCGAGCTTATGTTTATTGTCACAGCTCActtgtcgtcgtcatccttgtagtca
fasta Fasta
CG5398[29143]::S000169_fly_pretag_fwd
ATCATGCGTATACGCCACCTTATAAGCCCTTGGAAATTCCAGTGTGCAACgaagtgcataccaatcaggacccgc
fasta Fasta