Clone: 14365767356821757 B03
Tagged gene: CG6650
Identifier: FBgn0036402
Clone | FlyFos025812(pRedFlp-Hgr)(CG6650[38077]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3L | ||||||||
14014321 | 14021944 | 25305 | 32928 | - | gene | ptip | coding_transcript | |
14022925 | 14024804 | 33909 | 35788 | - | gene | endos | coding_transcript | |
14024529 | 14027740 | 35513 | 39786 | + | gene | CG6650 | coding_transcript | |
14024529 | 14027740 | 35513 | 39786 | + | mrna | FBtr0075769 | coding_transcript | |
14024529 | 14024695 | 35513 | 35679 | + | exon | coding_transcript | ||
14024529 | 14024695 | 35513 | 35679 | + | five_prime_utr | coding_transcript | ||
14024696 | 14024760 | 35680 | 35744 | + | intron | coding_transcript | ||
14024761 | 14025470 | 35745 | 36454 | + | exon | coding_transcript | ||
14024761 | 14025327 | 35745 | 36311 | + | five_prime_utr | coding_transcript | ||
14025201 | 14027740 | 36185 | 39786 | + | mrna | FBtr0304672 | coding_transcript | |
14025201 | 14025470 | 36185 | 36454 | + | exon | coding_transcript | ||
14025201 | 14025327 | 36185 | 36311 | + | five_prime_utr | coding_transcript | ||
14025328 | 14025470 | 36312 | 36454 | + | cds | coding_transcript | ||
14025328 | 14025470 | 36312 | 36454 | + | cds | coding_transcript | ||
14025471 | 14025524 | 36455 | 36508 | + | intron | coding_transcript | ||
14025471 | 14025524 | 36455 | 36508 | + | intron | coding_transcript | ||
14025525 | 14025743 | 36509 | 36727 | + | exon | coding_transcript | ||
14025525 | 14025743 | 36509 | 36727 | + | cds | coding_transcript | ||
14025525 | 14025743 | 36509 | 36727 | + | exon | coding_transcript | ||
14025525 | 14025743 | 36509 | 36727 | + | cds | coding_transcript | ||
14025744 | 14025832 | 36728 | 36816 | + | intron | coding_transcript | ||
14025744 | 14025832 | 36728 | 36816 | + | intron | coding_transcript | ||
14025833 | 14025997 | 36817 | 36981 | + | exon | coding_transcript | ||
14025833 | 14025997 | 36817 | 36981 | + | cds | coding_transcript | ||
14025833 | 14025997 | 36817 | 36981 | + | exon | coding_transcript | ||
14025833 | 14025997 | 36817 | 36981 | + | cds | coding_transcript | ||
14025998 | 14026056 | 36982 | 37040 | + | intron | coding_transcript | ||
14025998 | 14026056 | 36982 | 37040 | + | intron | coding_transcript | ||
14026057 | 14026783 | 37041 | 37767 | + | exon | coding_transcript | ||
14026057 | 14026783 | 37041 | 37767 | + | cds | coding_transcript | ||
14026057 | 14026783 | 37041 | 37767 | + | exon | coding_transcript | ||
14026057 | 14026783 | 37041 | 37767 | + | cds | coding_transcript | ||
14026784 | 14026844 | 37768 | 37828 | + | intron | coding_transcript | ||
14026784 | 14026844 | 37768 | 37828 | + | intron | coding_transcript | ||
14026845 | 14027740 | 37829 | 39786 | + | exon | coding_transcript | ||
14026845 | 14027740 | 37829 | 39786 | + | exon | coding_transcript | ||
14026845 | 14027096 | 37829 | 39142 | + | cds | coding_transcript | ||
14026845 | 14027096 | 37829 | 39142 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 38078 | 38137 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 38144 | 38860 | + | cds | SGFP | CLC | |
2271 | 2312 | 38867 | 38908 | + | cds | V5 | CLC | |
2313 | 2336 | 38909 | 38932 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 38933 | 38953 | + | cds | TEV | CLC | |
2358 | 2429 | 38954 | 39025 | + | cds | BLRP | CLC | |
3813 | 3846 | 39033 | 39066 | + | misc_recomb | FRT | CLC | |
dmel-5.43-3L | ||||||||
14027097 | 14027740 | 39143 | 39786 | + | three_prime_utr | coding_transcript | ||
14027097 | 14027740 | 39143 | 39786 | + | three_prime_utr | coding_transcript | ||
14027876 | 14029851 | 39922 | 41897 | + | gene | CG6661 | coding_transcript | |
14030098 | 14036659 | 42144 | 48705 | + | gene | Hsc70Cb | coding_transcript | |
14036786 | 14042992 | 48832 | 55038 | - | gene | blue | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG6650[38077]::S000169_fly_pretag_rev
AGTGAAATACTATGCAGTCTTTGCCTGTCCCATTGTGATAGCCGATCCTActtgtcgtcgtcatccttgtagtca
|
Fasta |
CG6650[38077]::S000169_fly_pretag_fwd
CGGCTGGGGCTGGCGACAACATCTCTGCCTCCGGACTCGCGGCACAGTTGgaagtgcataccaatcaggacccgc
|
Fasta |