Clone: 8180008395487431 F10

Tagged gene: CG11878
Identifier: FBgn0039310

Clone FlyFos025711(pRedFlp-Hgr)(CG11878[19584]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
21107270 21108964 11506 13200 - gene CG11892 coding_transcript
21104146 21105541 14929 16324 + gene CG10514 coding_transcript
21101511 21102934 17536 18959 + gene CG10513 coding_transcript
21099559 21100960 19510 21973 - gene CG11878 coding_transcript
21099559 21100960 19510 21973 - mrna FBtr0084821 coding_transcript
21100692 21100960 19510 20840 - exon coding_transcript
21100889 21100960 19510 19581 - three_prime_utr coding_transcript
21100692 21100888 19582 20840 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 19658 19691 - misc_recomb FRT CLC
2358 2429 19699 19770 - cds BLRP CLC
2337 2357 19771 19791 - cds TEV CLC
2313 2336 19792 19815 - cds Precision cut site CLC
2271 2312 19816 19857 - cds V5 CLC
1548 2264 19864 20580 - cds SGFP CLC
1482 1541 20587 20646 - cds 2xTY1 CLC
dmel-5.43-3R
21100636 21100691 20841 20896 - intron coding_transcript
21099559 21100635 20897 21973 - exon coding_transcript
21099570 21100635 20897 21962 - cds coding_transcript
21099559 21099569 21963 21973 - five_prime_utr coding_transcript
21095953 21098989 22543 25579 - gene CG11891 coding_transcript
21095953 21098989 22543 25579 - gene CG11889 coding_transcript
21091566 21093479 28053 29966 - gene CG11859 coding_transcript
21088989 21091457 30075 32543 + gene Aats-gln coding_transcript
21088465 21089014 32518 33067 - gene CG11858 coding_transcript
21086685 21088231 33301 34847 + gene CG10425 coding_transcript
21084619 21086492 35040 36913 - gene CG11857 coding_transcript
21075316 21084394 37138 46216 - gene Nup358 coding_transcript
21073600 21074822 46710 47932 - gene CG11875 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG11878[19584]::S000169_fly_pretag_rev
TTAAACTTTTATTTATTTTAACTATTTACACAAGTTCAAGATTATCATTActtgtcgtcgtcatccttgtagtca
 fasta Fasta
CG11878[19584]::S000169_fly_pretag_fwd
TAAGTGTCACACTGCCTTTTCTGGATCAGTTTGGATTGCTGGATGACATGgaagtgcataccaatcaggacccgc
 fasta Fasta