Clone: 6536462692990512 F08

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Export Fasta GenBank GFF

Validation(click to hide details)

Type	Status	Download / View
Grows in selection	good
NGS-based tag validation	bad

Genes in pFlyFos vector(click to hide details)

Gene		Clone relative			Genome relative
Name	Length	Start	End	Strand	Start	End	Strand
DsRed	716	8417	9132	+	8417	9132	+

Features(click to show details)

Start (Source)	End (Source)	Start	End	Strand	Type	Name	Source
pFlyFos
1	107	1	107	-	cds	LacZ	epicentre
4	21	4	21	-	primer_bind	CC2_rev	epicentre
310	593	310	593	+	misc_recomb	attB	epicentre
727	1386	727	1386	-	cds	Cat	epicentre
1605	1952	1605	1952	+	cds	redF	epicentre
2336	2953	2336	2953	+	rep_origin	oriV	epicentre
2953	3007	2953	3007	+	rep_origin	ori2	epicentre
3347	4102	3347	4102	+	cds	repE	epicentre
4681	5856	4681	5856	+	cds	parA	epicentre
5856	6827	5856	6827	+	cds	parB	epicentre
6900	7417	6900	7417	+	repeat_region	parC	epicentre
7633	8031	7633	8031	+	misc_binding	cos	epicentre
8049	8082	8049	8082	+	misc_recomb	loxP	epicentre
8182	8416	8182	8416	+	promoter	3xP3	epicentre
8417	9132	8417	9132	+	gene	DsRed	epicentre
8452	9132	8452	9132	+	cds	DsRed	epicentre
9284	9334	9284	9334	+	terminator	SV40	epicentre
9408	9630	9408	9630	-	cds	LacZ	epicentre
9559	9576	9559	9576	+	primer_bind	T7	epicentre
9610	9627	9610	9627	+	primer_bind	CC2_fwd	epicentre
dmel-5.43-2R
17958739	17960948	10963	13172	-	gene	CG11474	coding_transcript
17961043	17962842	13267	15066	-	gene	CG2921	coding_transcript
17963547	17966886	15771	19110	+	gene	GlcT-1	coding_transcript
17967663	17973272	19887	25496	+	gene	synj	coding_transcript
17973174	17976084	25398	28308	-	gene	CG13502	coding_transcript
17976928	17978760	29152	30984	-	gene	CG43393	coding_transcript
17978994	17987231	31218	40517	-	gene	CG11073	coding_transcript
17978994	17987231	31218	40517	-	mrna	FBtr0071797	coding_transcript
17978994	17987231	31218	40517	-	mrna	FBtr0300693	coding_transcript
17978994	17979564	31218	32850	-	exon		coding_transcript
17978994	17979564	31218	32850	-	exon		coding_transcript
17978994	17979139	31218	31363	-	three_prime_utr		coding_transcript
17978994	17979139	31218	31363	-	three_prime_utr		coding_transcript
17979140	17979564	31364	32850	-	cds		coding_transcript
17979140	17979564	31364	32850	-	cds		coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437	2470	31440	31473	-	misc_recomb	FRT	CLC
2358	2429	31481	31552	-	cds	BLRP	CLC
2337	2357	31553	31573	-	cds	TEV	CLC
2313	2336	31574	31597	-	cds	Precision cut site	CLC
2271	2312	31598	31639	-	cds	V5	CLC
1548	2264	31646	32362	-	cds	SGFP	CLC
1482	1541	32369	32428	-	cds	2xTY1	CLC
dmel-5.43-2R
17979565	17979646	32851	32932	-	intron		coding_transcript
17979565	17979646	32851	32932	-	intron		coding_transcript
17979647	17982292	32933	35578	-	exon		coding_transcript
17979647	17982292	32933	35578	-	cds		coding_transcript
17979647	17980222	32933	33508	-	exon		coding_transcript
17979647	17980222	32933	33508	-	cds		coding_transcript
17980223	17982028	33509	35314	-	intron		coding_transcript
17982029	17982292	35315	35578	-	exon		coding_transcript
17982029	17982292	35315	35578	-	cds		coding_transcript
17982293	17986486	35579	39772	-	intron		coding_transcript
17982293	17986486	35579	39772	-	intron		coding_transcript
17986487	17987231	39773	40517	-	exon		coding_transcript
17986487	17987231	39773	40517	-	exon		coding_transcript
17986487	17986586	39773	39872	-	cds		coding_transcript
17986487	17986586	39773	39872	-	cds		coding_transcript
17986587	17987231	39873	40517	-	five_prime_utr		coding_transcript
17986587	17987231	39873	40517	-	five_prime_utr		coding_transcript
17990693	17993468	43979	46754	+	gene	CG6613	coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence	Export
CG11073[31366]::S000169_fly_pretag_rev ATGGGCTATAAATAATTTAAAGTATTTGCGAACTCCTGGACTGCCTTCTActtgtcgtcgtcatccttgtagtca	Fasta
CG11073[31366]::S000169_fly_pretag_fwd CGCCTGGCATTCTCGTGCCCTTCGACAACGTGCAGCGAACTGGGGGGCAGgaagtgcataccaatcaggacccgc	Fasta