Clone: 5758764479850421 H11

Tagged gene: CG16964
Identifier: FBgn0032385

Clone FlyFos024974(pRedFlp-Hgr)(CG16964[13900]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2L
11947965 11948634 13730 15461 - gene CG16964 coding_transcript
11947965 11948634 13730 15461 - mrna FBtr0080282 coding_transcript
11948105 11948634 13730 15321 - exon coding_transcript
11948467 11948634 13730 13897 - three_prime_utr coding_transcript
11948110 11948466 13898 15316 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 13974 14007 - misc_recomb FRT CLC
2358 2429 14015 14086 - cds BLRP CLC
2337 2357 14087 14107 - cds TEV CLC
2313 2336 14108 14131 - cds Precision cut site CLC
2271 2312 14132 14173 - cds V5 CLC
1548 2264 14180 14896 - cds SGFP CLC
1482 1541 14903 14962 - cds 2xTY1 CLC
dmel-5.43-2L
11948105 11948109 15317 15321 - five_prime_utr coding_transcript
11948035 11948104 15322 15391 - intron coding_transcript
11947965 11948034 15392 15461 - exon coding_transcript
11947965 11948034 15392 15461 - five_prime_utr coding_transcript
11944141 11946756 16670 19285 - gene Cry coding_transcript
11937969 11939202 24224 25457 - gene Or33c coding_transcript
11936181 11937501 25925 27245 - gene Or33b coding_transcript
11934505 11935716 27710 28921 - gene Or33a coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG16964[13900]::S000169_fly_pretag_rev
ATTGTATGATATCATCGCTTATCTATTAATGAGATTATTGTCACCAACTActtgtcgtcgtcatccttgtagtca
 fasta Fasta
CG16964[13900]::S000169_fly_pretag_fwd
CAAAGAAAATTGATGAGTTGCAAAAGCGTAAGATTGAATATGTAAACAAGgaagtgcataccaatcaggacccgc
 fasta Fasta