Clone: 5758764479850421 H04

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Export Fasta GenBank GFF

Validation(click to hide details)

Type	Status	Download / View
Grows in selection	good
NGS-based tag validation	bad

Genes in pFlyFos vector(click to hide details)

Gene		Clone relative			Genome relative
Name	Length	Start	End	Strand	Start	End	Strand
DsRed	716	8417	9132	+	8417	9132	+

Features(click to show details)

Start (Source)	End (Source)	Start	End	Strand	Type	Name	Source
pFlyFos
1	107	1	107	-	cds	LacZ	epicentre
4	21	4	21	-	primer_bind	CC2_rev	epicentre
310	593	310	593	+	misc_recomb	attB	epicentre
727	1386	727	1386	-	cds	Cat	epicentre
1605	1952	1605	1952	+	cds	redF	epicentre
2336	2953	2336	2953	+	rep_origin	oriV	epicentre
2953	3007	2953	3007	+	rep_origin	ori2	epicentre
3347	4102	3347	4102	+	cds	repE	epicentre
4681	5856	4681	5856	+	cds	parA	epicentre
5856	6827	5856	6827	+	cds	parB	epicentre
6900	7417	6900	7417	+	repeat_region	parC	epicentre
7633	8031	7633	8031	+	misc_binding	cos	epicentre
8049	8082	8049	8082	+	misc_recomb	loxP	epicentre
8182	8416	8182	8416	+	promoter	3xP3	epicentre
8417	9132	8417	9132	+	gene	DsRed	epicentre
8452	9132	8452	9132	+	cds	DsRed	epicentre
9284	9334	9284	9334	+	terminator	SV40	epicentre
9408	9630	9408	9630	-	cds	LacZ	epicentre
9559	9576	9559	9576	+	primer_bind	T7	epicentre
9610	9627	9610	9627	+	primer_bind	CC2_fwd	epicentre
dmel-5.43-3R
12270729	12279550	10680	19501	+	gene	Pak3	coding_transcript
12268966	12270526	19704	21264	-	gene	CG14882	coding_transcript
12267728	12268729	21501	22502	+	gene	CG14894	coding_transcript
12262602	12267382	22848	27628	+	gene	ema	coding_transcript
12261767	12262315	27915	28463	+	gene	mRpS33	coding_transcript
12260647	12261788	28442	30645	-	gene	CG14881	coding_transcript
12260647	12261788	28442	30645	-	mrna	FBtr0083287	coding_transcript
12260647	12261788	28442	30645	-	mrna	FBtr0083288	coding_transcript
12261078	12261788	28442	30214	-	exon		coding_transcript
12261378	12261788	28442	29914	-	exon		coding_transcript
12261416	12261788	28442	29876	-	three_prime_utr		coding_transcript
12261750	12261788	28442	28480	-	three_prime_utr		coding_transcript
12261378	12261749	28481	29914	-	cds		coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437	2470	28557	28590	-	misc_recomb	FRT	CLC
2358	2429	28598	28669	-	cds	BLRP	CLC
2337	2357	28670	28690	-	cds	TEV	CLC
2313	2336	28691	28714	-	cds	Precision cut site	CLC
2271	2312	28715	28756	-	cds	V5	CLC
1548	2264	28763	29479	-	cds	SGFP	CLC
1482	1541	29486	29545	-	cds	2xTY1	CLC
dmel-5.43-3R
12261078	12261415	29877	30214	-	cds		coding_transcript
12261290	12261377	29915	30002	-	intron		coding_transcript
12261078	12261289	30003	30214	-	exon		coding_transcript
12261078	12261289	30003	30214	-	cds		coding_transcript
12261024	12261077	30215	30268	-	intron		coding_transcript
12261024	12261077	30215	30268	-	intron		coding_transcript
12260856	12261023	30269	30436	-	exon		coding_transcript
12260856	12261023	30269	30436	-	cds		coding_transcript
12260856	12261023	30269	30436	-	exon		coding_transcript
12260856	12261023	30269	30436	-	cds		coding_transcript
12260796	12260855	30437	30496	-	intron		coding_transcript
12260796	12260855	30437	30496	-	intron		coding_transcript
12260647	12260795	30497	30645	-	exon		coding_transcript
12260647	12260795	30497	30645	-	exon		coding_transcript
12260687	12260795	30497	30605	-	cds		coding_transcript
12260687	12260795	30497	30605	-	cds		coding_transcript
12260647	12260686	30606	30645	-	five_prime_utr		coding_transcript
12260647	12260686	30606	30645	-	five_prime_utr		coding_transcript
12258703	12260462	30830	32589	-	gene	CG17565	coding_transcript
12256403	12258619	32673	34889	-	gene	CG31279	coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence	Export
CG14881[28483]::S000169_fly_pretag_fwd AGAACGACGAGGTGGTGTTCGCCGGCAGCGCCAAGTTGCTGACTCGCAACgaagtgcataccaatcaggacccgc	Fasta
CG14881[28483]::S000169_fly_pretag_rev AAATAAATATTCTAACATCCACTTTTATTGAACCAAAGCTAGTCTTTTTActtgtcgtcgtcatccttgtagtca	Fasta