Clone: 5758764479850421 H04
Tagged gene: CG14881
Identifier: FBgn0038425
| Clone | FlyFos024895(pRedFlp-Hgr)(CG14881[28483]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | bad |
Genes in pFlyFos vector
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3R | ||||||||
| 12270729 | 12279550 | 10680 | 19501 | + | gene | Pak3 | coding_transcript | |
| 12268966 | 12270526 | 19704 | 21264 | - | gene | CG14882 | coding_transcript | |
| 12267728 | 12268729 | 21501 | 22502 | + | gene | CG14894 | coding_transcript | |
| 12262602 | 12267382 | 22848 | 27628 | + | gene | ema | coding_transcript | |
| 12261767 | 12262315 | 27915 | 28463 | + | gene | mRpS33 | coding_transcript | |
| 12260647 | 12261788 | 28442 | 30645 | - | gene | CG14881 | coding_transcript | |
| 12260647 | 12261788 | 28442 | 30645 | - | mrna | FBtr0083287 | coding_transcript | |
| 12260647 | 12261788 | 28442 | 30645 | - | mrna | FBtr0083288 | coding_transcript | |
| 12261078 | 12261788 | 28442 | 30214 | - | exon | coding_transcript | ||
| 12261378 | 12261788 | 28442 | 29914 | - | exon | coding_transcript | ||
| 12261416 | 12261788 | 28442 | 29876 | - | three_prime_utr | coding_transcript | ||
| 12261750 | 12261788 | 28442 | 28480 | - | three_prime_utr | coding_transcript | ||
| 12261378 | 12261749 | 28481 | 29914 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 28557 | 28590 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 28598 | 28669 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 28670 | 28690 | - | cds | TEV | CLC | |
| 2313 | 2336 | 28691 | 28714 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 28715 | 28756 | - | cds | V5 | CLC | |
| 1548 | 2264 | 28763 | 29479 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 29486 | 29545 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-3R | ||||||||
| 12261078 | 12261415 | 29877 | 30214 | - | cds | coding_transcript | ||
| 12261290 | 12261377 | 29915 | 30002 | - | intron | coding_transcript | ||
| 12261078 | 12261289 | 30003 | 30214 | - | exon | coding_transcript | ||
| 12261078 | 12261289 | 30003 | 30214 | - | cds | coding_transcript | ||
| 12261024 | 12261077 | 30215 | 30268 | - | intron | coding_transcript | ||
| 12261024 | 12261077 | 30215 | 30268 | - | intron | coding_transcript | ||
| 12260856 | 12261023 | 30269 | 30436 | - | exon | coding_transcript | ||
| 12260856 | 12261023 | 30269 | 30436 | - | cds | coding_transcript | ||
| 12260856 | 12261023 | 30269 | 30436 | - | exon | coding_transcript | ||
| 12260856 | 12261023 | 30269 | 30436 | - | cds | coding_transcript | ||
| 12260796 | 12260855 | 30437 | 30496 | - | intron | coding_transcript | ||
| 12260796 | 12260855 | 30437 | 30496 | - | intron | coding_transcript | ||
| 12260647 | 12260795 | 30497 | 30645 | - | exon | coding_transcript | ||
| 12260647 | 12260795 | 30497 | 30645 | - | exon | coding_transcript | ||
| 12260687 | 12260795 | 30497 | 30605 | - | cds | coding_transcript | ||
| 12260687 | 12260795 | 30497 | 30605 | - | cds | coding_transcript | ||
| 12260647 | 12260686 | 30606 | 30645 | - | five_prime_utr | coding_transcript | ||
| 12260647 | 12260686 | 30606 | 30645 | - | five_prime_utr | coding_transcript | ||
| 12258703 | 12260462 | 30830 | 32589 | - | gene | CG17565 | coding_transcript | |
| 12256403 | 12258619 | 32673 | 34889 | - | gene | CG31279 | coding_transcript | |
Sets
Oligos
| Name/Sequence | Export |
|---|---|
|
CG14881[28483]::S000169_fly_pretag_rev
AAATAAATATTCTAACATCCACTTTTATTGAACCAAAGCTAGTCTTTTTActtgtcgtcgtcatccttgtagtca
|
Fasta
|
|
CG14881[28483]::S000169_fly_pretag_fwd
AGAACGACGAGGTGGTGTTCGCCGGCAGCGCCAAGTTGCTGACTCGCAACgaagtgcataccaatcaggacccgc
|
Fasta
|