Clone: 35649249831002394 G10
Tagged gene: Gyc88E
Identifier: FBgn0038295
| Clone | FlyFos024489(pRedFlp-Hgr)(Gyc88E[17475]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | bad |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3R | ||||||||
| 11016780 | 11021932 | 11429 | 16581 | + | gene | CG6752 | coding_transcript | |
| 11011773 | 11016964 | 16397 | 22650 | - | gene | Gyc88E | coding_transcript | |
| 11011773 | 11016964 | 16397 | 22650 | - | mrna | FBtr0110961 | coding_transcript | |
| 11015720 | 11016964 | 16397 | 18703 | - | exon | coding_transcript | ||
| 11015889 | 11016964 | 16397 | 17472 | - | three_prime_utr | coding_transcript | ||
| 11011773 | 11016059 | 17302 | 22650 | - | mrna | FBtr0306245 | coding_transcript | |
| 11015720 | 11016059 | 17302 | 18703 | - | exon | coding_transcript | ||
| 11015889 | 11016059 | 17302 | 17472 | - | three_prime_utr | coding_transcript | ||
| 11015720 | 11015888 | 17473 | 18703 | - | cds | coding_transcript | ||
| 11015720 | 11015888 | 17473 | 18703 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 17549 | 17582 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 17590 | 17661 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 17662 | 17682 | - | cds | TEV | CLC | |
| 2313 | 2336 | 17683 | 17706 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 17707 | 17748 | - | cds | V5 | CLC | |
| 1548 | 2264 | 17755 | 18471 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 18478 | 18537 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-3R | ||||||||
| 11015647 | 11015719 | 18704 | 18776 | - | intron | coding_transcript | ||
| 11015647 | 11015719 | 18704 | 18776 | - | intron | coding_transcript | ||
| 11015362 | 11015646 | 18777 | 19061 | - | exon | coding_transcript | ||
| 11015362 | 11015646 | 18777 | 19061 | - | cds | coding_transcript | ||
| 11015362 | 11015646 | 18777 | 19061 | - | exon | coding_transcript | ||
| 11015362 | 11015646 | 18777 | 19061 | - | cds | coding_transcript | ||
| 11015301 | 11015361 | 19062 | 19122 | - | intron | coding_transcript | ||
| 11015301 | 11015361 | 19062 | 19122 | - | intron | coding_transcript | ||
| 11011773 | 11015325 | 19098 | 22650 | - | mrna | FBtr0083027 | coding_transcript | |
| 11011773 | 11015325 | 19098 | 22650 | - | mrna | FBtr0083028 | coding_transcript | |
| 11015067 | 11015325 | 19098 | 19356 | - | exon | coding_transcript | ||
| 11015088 | 11015325 | 19098 | 19335 | - | exon | coding_transcript | ||
| 11015305 | 11015325 | 19098 | 19118 | - | three_prime_utr | coding_transcript | ||
| 11015305 | 11015325 | 19098 | 19118 | - | three_prime_utr | coding_transcript | ||
| 11015067 | 11015304 | 19119 | 19356 | - | cds | coding_transcript | ||
| 11015088 | 11015304 | 19119 | 19335 | - | cds | coding_transcript | ||
| 11015067 | 11015300 | 19123 | 19356 | - | exon | coding_transcript | ||
| 11015067 | 11015300 | 19123 | 19356 | - | cds | coding_transcript | ||
| 11015067 | 11015300 | 19123 | 19356 | - | exon | coding_transcript | ||
| 11015067 | 11015300 | 19123 | 19356 | - | cds | coding_transcript | ||
| 11015016 | 11015087 | 19336 | 19407 | - | intron | coding_transcript | ||
| 11015016 | 11015066 | 19357 | 19407 | - | intron | coding_transcript | ||
| 11015016 | 11015066 | 19357 | 19407 | - | intron | coding_transcript | ||
| 11015016 | 11015066 | 19357 | 19407 | - | intron | coding_transcript | ||
| 11013953 | 11015015 | 19408 | 20470 | - | exon | coding_transcript | ||
| 11013953 | 11015015 | 19408 | 20470 | - | cds | coding_transcript | ||
| 11013953 | 11015015 | 19408 | 20470 | - | exon | coding_transcript | ||
| 11013953 | 11015015 | 19408 | 20470 | - | cds | coding_transcript | ||
| 11013953 | 11015015 | 19408 | 20470 | - | exon | coding_transcript | ||
| 11013953 | 11015015 | 19408 | 20470 | - | cds | coding_transcript | ||
| 11013953 | 11015015 | 19408 | 20470 | - | exon | coding_transcript | ||
| 11013953 | 11015015 | 19408 | 20470 | - | cds | coding_transcript | ||
| 11013899 | 11013952 | 20471 | 20524 | - | intron | coding_transcript | ||
| 11013899 | 11013952 | 20471 | 20524 | - | intron | coding_transcript | ||
| 11013899 | 11013952 | 20471 | 20524 | - | intron | coding_transcript | ||
| 11013899 | 11013952 | 20471 | 20524 | - | intron | coding_transcript | ||
| 11013748 | 11013898 | 20525 | 20675 | - | exon | coding_transcript | ||
| 11013748 | 11013898 | 20525 | 20675 | - | cds | coding_transcript | ||
| 11013748 | 11013898 | 20525 | 20675 | - | exon | coding_transcript | ||
| 11013748 | 11013898 | 20525 | 20675 | - | cds | coding_transcript | ||
| 11013748 | 11013898 | 20525 | 20675 | - | exon | coding_transcript | ||
| 11013748 | 11013898 | 20525 | 20675 | - | cds | coding_transcript | ||
| 11013748 | 11013898 | 20525 | 20675 | - | exon | coding_transcript | ||
| 11013748 | 11013898 | 20525 | 20675 | - | cds | coding_transcript | ||
| 11013691 | 11013747 | 20676 | 20732 | - | intron | coding_transcript | ||
| 11013691 | 11013747 | 20676 | 20732 | - | intron | coding_transcript | ||
| 11013691 | 11013747 | 20676 | 20732 | - | intron | coding_transcript | ||
| 11013691 | 11013747 | 20676 | 20732 | - | intron | coding_transcript | ||
| 11013544 | 11013690 | 20733 | 20879 | - | exon | coding_transcript | ||
| 11013544 | 11013690 | 20733 | 20879 | - | cds | coding_transcript | ||
| 11013544 | 11013690 | 20733 | 20879 | - | exon | coding_transcript | ||
| 11013544 | 11013690 | 20733 | 20879 | - | cds | coding_transcript | ||
| 11013544 | 11013690 | 20733 | 20879 | - | exon | coding_transcript | ||
| 11013544 | 11013690 | 20733 | 20879 | - | cds | coding_transcript | ||
| 11013544 | 11013690 | 20733 | 20879 | - | exon | coding_transcript | ||
| 11013544 | 11013690 | 20733 | 20879 | - | cds | coding_transcript | ||
| 11013474 | 11013543 | 20880 | 20949 | - | intron | coding_transcript | ||
| 11013474 | 11013543 | 20880 | 20949 | - | intron | coding_transcript | ||
| 11013474 | 11013543 | 20880 | 20949 | - | intron | coding_transcript | ||
| 11013474 | 11013543 | 20880 | 20949 | - | intron | coding_transcript | ||
| 11013369 | 11013473 | 20950 | 21054 | - | exon | coding_transcript | ||
| 11013369 | 11013473 | 20950 | 21054 | - | cds | coding_transcript | ||
| 11013369 | 11013473 | 20950 | 21054 | - | exon | coding_transcript | ||
| 11013369 | 11013473 | 20950 | 21054 | - | cds | coding_transcript | ||
| 11013369 | 11013473 | 20950 | 21054 | - | exon | coding_transcript | ||
| 11013369 | 11013473 | 20950 | 21054 | - | cds | coding_transcript | ||
| 11013369 | 11013473 | 20950 | 21054 | - | exon | coding_transcript | ||
| 11013369 | 11013473 | 20950 | 21054 | - | cds | coding_transcript | ||
| 11013307 | 11013368 | 21055 | 21116 | - | intron | coding_transcript | ||
| 11013307 | 11013368 | 21055 | 21116 | - | intron | coding_transcript | ||
| 11013307 | 11013368 | 21055 | 21116 | - | intron | coding_transcript | ||
| 11013307 | 11013368 | 21055 | 21116 | - | intron | coding_transcript | ||
| 11013080 | 11013306 | 21117 | 21343 | - | exon | coding_transcript | ||
| 11013080 | 11013306 | 21117 | 21343 | - | cds | coding_transcript | ||
| 11013080 | 11013306 | 21117 | 21343 | - | exon | coding_transcript | ||
| 11013080 | 11013306 | 21117 | 21343 | - | cds | coding_transcript | ||
| 11013080 | 11013306 | 21117 | 21343 | - | exon | coding_transcript | ||
| 11013080 | 11013306 | 21117 | 21343 | - | cds | coding_transcript | ||
| 11013080 | 11013306 | 21117 | 21343 | - | exon | coding_transcript | ||
| 11013080 | 11013306 | 21117 | 21343 | - | cds | coding_transcript | ||
| 11012953 | 11013079 | 21344 | 21470 | - | intron | coding_transcript | ||
| 11012953 | 11013079 | 21344 | 21470 | - | intron | coding_transcript | ||
| 11012953 | 11013079 | 21344 | 21470 | - | intron | coding_transcript | ||
| 11012953 | 11013079 | 21344 | 21470 | - | intron | coding_transcript | ||
| 11012820 | 11012952 | 21471 | 21603 | - | exon | coding_transcript | ||
| 11012820 | 11012952 | 21471 | 21603 | - | cds | coding_transcript | ||
| 11012820 | 11012952 | 21471 | 21603 | - | exon | coding_transcript | ||
| 11012820 | 11012952 | 21471 | 21603 | - | cds | coding_transcript | ||
| 11012820 | 11012952 | 21471 | 21603 | - | exon | coding_transcript | ||
| 11012820 | 11012952 | 21471 | 21603 | - | cds | coding_transcript | ||
| 11012820 | 11012952 | 21471 | 21603 | - | exon | coding_transcript | ||
| 11012820 | 11012952 | 21471 | 21603 | - | cds | coding_transcript | ||
| 11012765 | 11012819 | 21604 | 21658 | - | intron | coding_transcript | ||
| 11012765 | 11012819 | 21604 | 21658 | - | intron | coding_transcript | ||
| 11012765 | 11012819 | 21604 | 21658 | - | intron | coding_transcript | ||
| 11012765 | 11012819 | 21604 | 21658 | - | intron | coding_transcript | ||
| 11012641 | 11012764 | 21659 | 21782 | - | exon | coding_transcript | ||
| 11012641 | 11012764 | 21659 | 21782 | - | cds | coding_transcript | ||
| 11012641 | 11012764 | 21659 | 21782 | - | exon | coding_transcript | ||
| 11012641 | 11012764 | 21659 | 21782 | - | cds | coding_transcript | ||
| 11012641 | 11012764 | 21659 | 21782 | - | exon | coding_transcript | ||
| 11012641 | 11012764 | 21659 | 21782 | - | cds | coding_transcript | ||
| 11012641 | 11012764 | 21659 | 21782 | - | exon | coding_transcript | ||
| 11012641 | 11012764 | 21659 | 21782 | - | cds | coding_transcript | ||
| 11012577 | 11012640 | 21783 | 21846 | - | intron | coding_transcript | ||
| 11012577 | 11012640 | 21783 | 21846 | - | intron | coding_transcript | ||
| 11012577 | 11012640 | 21783 | 21846 | - | intron | coding_transcript | ||
| 11012577 | 11012640 | 21783 | 21846 | - | intron | coding_transcript | ||
| 11012369 | 11012576 | 21847 | 22054 | - | exon | coding_transcript | ||
| 11012369 | 11012576 | 21847 | 22054 | - | cds | coding_transcript | ||
| 11012369 | 11012576 | 21847 | 22054 | - | exon | coding_transcript | ||
| 11012369 | 11012576 | 21847 | 22054 | - | cds | coding_transcript | ||
| 11012369 | 11012576 | 21847 | 22054 | - | exon | coding_transcript | ||
| 11012369 | 11012576 | 21847 | 22054 | - | cds | coding_transcript | ||
| 11012369 | 11012576 | 21847 | 22054 | - | exon | coding_transcript | ||
| 11012369 | 11012576 | 21847 | 22054 | - | cds | coding_transcript | ||
| 11012315 | 11012368 | 22055 | 22108 | - | intron | coding_transcript | ||
| 11012315 | 11012368 | 22055 | 22108 | - | intron | coding_transcript | ||
| 11012315 | 11012368 | 22055 | 22108 | - | intron | coding_transcript | ||
| 11012315 | 11012368 | 22055 | 22108 | - | intron | coding_transcript | ||
| 11012035 | 11012314 | 22109 | 22388 | - | exon | coding_transcript | ||
| 11012035 | 11012314 | 22109 | 22388 | - | cds | coding_transcript | ||
| 11012035 | 11012314 | 22109 | 22388 | - | exon | coding_transcript | ||
| 11012035 | 11012314 | 22109 | 22388 | - | cds | coding_transcript | ||
| 11012035 | 11012314 | 22109 | 22388 | - | exon | coding_transcript | ||
| 11012035 | 11012314 | 22109 | 22388 | - | cds | coding_transcript | ||
| 11012035 | 11012314 | 22109 | 22388 | - | exon | coding_transcript | ||
| 11012035 | 11012314 | 22109 | 22388 | - | cds | coding_transcript | ||
| 11011970 | 11012034 | 22389 | 22453 | - | intron | coding_transcript | ||
| 11011970 | 11012034 | 22389 | 22453 | - | intron | coding_transcript | ||
| 11011970 | 11012034 | 22389 | 22453 | - | intron | coding_transcript | ||
| 11011970 | 11012034 | 22389 | 22453 | - | intron | coding_transcript | ||
| 11011773 | 11011969 | 22454 | 22650 | - | exon | coding_transcript | ||
| 11011773 | 11011969 | 22454 | 22650 | - | exon | coding_transcript | ||
| 11011773 | 11011969 | 22454 | 22650 | - | exon | coding_transcript | ||
| 11011773 | 11011969 | 22454 | 22650 | - | exon | coding_transcript | ||
| 11011802 | 11011969 | 22454 | 22621 | - | cds | coding_transcript | ||
| 11011802 | 11011969 | 22454 | 22621 | - | cds | coding_transcript | ||
| 11011802 | 11011969 | 22454 | 22621 | - | cds | coding_transcript | ||
| 11011802 | 11011969 | 22454 | 22621 | - | cds | coding_transcript | ||
| 11011773 | 11011801 | 22622 | 22650 | - | five_prime_utr | coding_transcript | ||
| 11011773 | 11011801 | 22622 | 22650 | - | five_prime_utr | coding_transcript | ||
| 11011773 | 11011801 | 22622 | 22650 | - | five_prime_utr | coding_transcript | ||
| 11011773 | 11011801 | 22622 | 22650 | - | five_prime_utr | coding_transcript | ||
| 10996347 | 11006143 | 28280 | 38076 | + | gene | Mf | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
Gyc88E[17475]::S000169_fly_pretag_rev
TACATGATATGGAATTGATGAAGGGTGTGCTCGTGCTGCCCCCTCCTCTActtgtcgtcgtcatccttgtagtca
|
Fasta
|
|
Gyc88E[17475]::S000169_fly_pretag_fwd
GCAATGGACGTCATTCGCACCGGATGCACTCGAATGCTTGCCGGATTCTGgaagtgcataccaatcaggacccgc
|
Fasta
|