Clone: 6005613252476711 F11
Tagged gene: CG33958
Identifier: FBgn0053958
Clone | FlyFos024256(pRedFlp-Hgr)(CG33958[18377]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
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Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | bad |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2R | ||||||||
14068001 | 14070024 | 14085 | 16108 | + | gene | nopo | coding_transcript | |
14069940 | 14071618 | 16024 | 17702 | - | gene | CG5721 | coding_transcript | |
14071886 | 14080341 | 17970 | 27487 | - | gene | CG33958 | coding_transcript | |
14071886 | 14080341 | 17970 | 27487 | - | mrna | FBtr0099994 | coding_transcript | |
14071886 | 14072446 | 17970 | 19592 | - | exon | coding_transcript | ||
14071886 | 14072290 | 17970 | 18374 | - | three_prime_utr | coding_transcript | ||
14072291 | 14072446 | 18375 | 19592 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 18451 | 18484 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 18492 | 18563 | - | cds | BLRP | CLC | |
2337 | 2357 | 18564 | 18584 | - | cds | TEV | CLC | |
2313 | 2336 | 18585 | 18608 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 18609 | 18650 | - | cds | V5 | CLC | |
1548 | 2264 | 18657 | 19373 | - | cds | SGFP | CLC | |
1482 | 1541 | 19380 | 19439 | - | cds | 2xTY1 | CLC | |
dmel-5.43-2R | ||||||||
14072447 | 14072669 | 19593 | 19815 | - | intron | coding_transcript | ||
14072670 | 14072980 | 19816 | 20126 | - | exon | coding_transcript | ||
14072670 | 14072980 | 19816 | 20126 | - | cds | coding_transcript | ||
14072832 | 14080341 | 19978 | 27487 | - | mrna | FBtr0114576 | coding_transcript | |
14072832 | 14073270 | 19978 | 20416 | - | exon | coding_transcript | ||
14072832 | 14073072 | 19978 | 20218 | - | three_prime_utr | coding_transcript | ||
14072981 | 14073146 | 20127 | 20292 | - | intron | coding_transcript | ||
14073073 | 14073270 | 20219 | 20416 | - | cds | coding_transcript | ||
14073147 | 14073270 | 20293 | 20416 | - | exon | coding_transcript | ||
14073147 | 14073270 | 20293 | 20416 | - | cds | coding_transcript | ||
14073271 | 14073427 | 20417 | 20573 | - | intron | coding_transcript | ||
14073271 | 14073427 | 20417 | 20573 | - | intron | coding_transcript | ||
14073428 | 14073517 | 20574 | 20663 | - | exon | coding_transcript | ||
14073428 | 14073517 | 20574 | 20663 | - | cds | coding_transcript | ||
14073428 | 14073517 | 20574 | 20663 | - | exon | coding_transcript | ||
14073428 | 14073517 | 20574 | 20663 | - | cds | coding_transcript | ||
14073518 | 14073569 | 20664 | 20715 | - | intron | coding_transcript | ||
14073518 | 14073569 | 20664 | 20715 | - | intron | coding_transcript | ||
14073570 | 14073692 | 20716 | 20838 | - | exon | coding_transcript | ||
14073570 | 14073692 | 20716 | 20838 | - | cds | coding_transcript | ||
14073570 | 14073692 | 20716 | 20838 | - | exon | coding_transcript | ||
14073570 | 14073692 | 20716 | 20838 | - | cds | coding_transcript | ||
14073693 | 14073750 | 20839 | 20896 | - | intron | coding_transcript | ||
14073693 | 14073750 | 20839 | 20896 | - | intron | coding_transcript | ||
14073751 | 14073880 | 20897 | 21026 | - | exon | coding_transcript | ||
14073751 | 14073880 | 20897 | 21026 | - | cds | coding_transcript | ||
14073751 | 14073880 | 20897 | 21026 | - | exon | coding_transcript | ||
14073751 | 14073880 | 20897 | 21026 | - | cds | coding_transcript | ||
14073881 | 14073932 | 21027 | 21078 | - | intron | coding_transcript | ||
14073881 | 14073932 | 21027 | 21078 | - | intron | coding_transcript | ||
14073933 | 14074061 | 21079 | 21207 | - | exon | coding_transcript | ||
14073933 | 14074061 | 21079 | 21207 | - | cds | coding_transcript | ||
14073933 | 14074061 | 21079 | 21207 | - | exon | coding_transcript | ||
14073933 | 14074061 | 21079 | 21207 | - | cds | coding_transcript | ||
14074062 | 14074117 | 21208 | 21263 | - | intron | coding_transcript | ||
14074062 | 14074117 | 21208 | 21263 | - | intron | coding_transcript | ||
14074118 | 14074354 | 21264 | 21500 | - | exon | coding_transcript | ||
14074118 | 14074354 | 21264 | 21500 | - | cds | coding_transcript | ||
14074118 | 14074354 | 21264 | 21500 | - | exon | coding_transcript | ||
14074118 | 14074354 | 21264 | 21500 | - | cds | coding_transcript | ||
14074355 | 14074450 | 21501 | 21596 | - | intron | coding_transcript | ||
14074355 | 14074450 | 21501 | 21596 | - | intron | coding_transcript | ||
14074451 | 14074741 | 21597 | 21887 | - | exon | coding_transcript | ||
14074451 | 14074741 | 21597 | 21887 | - | cds | coding_transcript | ||
14074451 | 14074741 | 21597 | 21887 | - | exon | coding_transcript | ||
14074451 | 14074741 | 21597 | 21887 | - | cds | coding_transcript | ||
14074742 | 14074792 | 21888 | 21938 | - | intron | coding_transcript | ||
14074742 | 14074792 | 21888 | 21938 | - | intron | coding_transcript | ||
14074793 | 14074890 | 21939 | 22036 | - | exon | coding_transcript | ||
14074793 | 14074890 | 21939 | 22036 | - | cds | coding_transcript | ||
14074793 | 14074890 | 21939 | 22036 | - | exon | coding_transcript | ||
14074793 | 14074890 | 21939 | 22036 | - | cds | coding_transcript | ||
14074891 | 14078006 | 22037 | 25152 | - | intron | coding_transcript | ||
14074891 | 14078006 | 22037 | 25152 | - | intron | coding_transcript | ||
14075227 | 14075794 | 22373 | 22940 | + | gene | CG14499 | coding_transcript | |
14075227 | 14075794 | 22373 | 22940 | + | mrna | FBtr0310320 | coding_transcript | |
14075227 | 14075794 | 22373 | 22940 | + | exon | coding_transcript | ||
14075227 | 14075794 | 22373 | 22940 | + | cds | coding_transcript | ||
14076484 | 14077159 | 23630 | 24305 | + | gene | CG14500 | coding_transcript | |
14076484 | 14077159 | 23630 | 24305 | + | mrna | FBtr0086752 | coding_transcript | |
14076484 | 14077159 | 23630 | 24305 | + | exon | coding_transcript | ||
14076484 | 14076494 | 23630 | 23640 | + | five_prime_utr | coding_transcript | ||
14076495 | 14077067 | 23641 | 24213 | + | cds | coding_transcript | ||
14077068 | 14077159 | 24214 | 24305 | + | three_prime_utr | coding_transcript | ||
14078007 | 14078114 | 25153 | 25260 | - | exon | coding_transcript | ||
14078007 | 14078114 | 25153 | 25260 | - | cds | coding_transcript | ||
14078007 | 14078114 | 25153 | 25260 | - | exon | coding_transcript | ||
14078007 | 14078114 | 25153 | 25260 | - | cds | coding_transcript | ||
14078115 | 14078806 | 25261 | 25952 | - | intron | coding_transcript | ||
14078115 | 14078806 | 25261 | 25952 | - | intron | coding_transcript | ||
14078807 | 14079202 | 25953 | 26348 | - | exon | coding_transcript | ||
14078807 | 14079202 | 25953 | 26348 | - | exon | coding_transcript | ||
14078807 | 14079142 | 25953 | 26288 | - | cds | coding_transcript | ||
14078807 | 14079142 | 25953 | 26288 | - | cds | coding_transcript | ||
14079143 | 14079202 | 26289 | 26348 | - | five_prime_utr | coding_transcript | ||
14079143 | 14079202 | 26289 | 26348 | - | five_prime_utr | coding_transcript | ||
14079203 | 14080277 | 26349 | 27423 | - | intron | coding_transcript | ||
14079203 | 14080277 | 26349 | 27423 | - | intron | coding_transcript | ||
14080278 | 14080341 | 27424 | 27487 | - | exon | coding_transcript | ||
14080278 | 14080341 | 27424 | 27487 | - | five_prime_utr | coding_transcript | ||
14080278 | 14080341 | 27424 | 27487 | - | exon | coding_transcript | ||
14080278 | 14080341 | 27424 | 27487 | - | five_prime_utr | coding_transcript | ||
14095260 | 14096483 | 42406 | 43629 | + | gene | CG30114 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
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CG33958[18377]::S000169_fly_pretag_fwd
ACCACCTGAAGCTGCATCCGCCAACCGACTACAAGCTGCCAAAGCGGAAAgaagtgcataccaatcaggacccgc
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CG33958[18377]::S000169_fly_pretag_rev
GATAAGCATTATTTGGCCTAGCCGGAAAACTTGCAGTTGGTTGCATCTCActtgtcgtcgtcatccttgtagtca
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