Clone: 6005613252476711 B08

Tagged gene: CG16947
Identifier: FBgn0031816

Clone FlyFos024180(pRedFlp-Hgr)(CG16947[16962]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2L
6456106 6459008 13538 16440 + gene frj coding_transcript
6459079 6463843 16511 22337 - gene CG16947 coding_transcript
6459079 6463843 16511 22337 - mrna FBtr0079271 coding_transcript
6459079 6459647 16511 18141 - exon coding_transcript
6459079 6459527 16511 16959 - three_prime_utr coding_transcript
6459528 6459647 16960 18141 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 17036 17069 - misc_recomb FRT CLC
2358 2429 17077 17148 - cds BLRP CLC
2337 2357 17149 17169 - cds TEV CLC
2313 2336 17170 17193 - cds Precision cut site CLC
2271 2312 17194 17235 - cds V5 CLC
1548 2264 17242 17958 - cds SGFP CLC
1482 1541 17965 18024 - cds 2xTY1 CLC
dmel-5.43-2L
6459648 6459715 18142 18209 - intron coding_transcript
6459716 6459994 18210 18488 - exon coding_transcript
6459716 6459994 18210 18488 - cds coding_transcript
6459995 6460322 18489 18816 - intron coding_transcript
6460323 6460481 18817 18975 - exon coding_transcript
6460323 6460481 18817 18975 - cds coding_transcript
6460482 6460554 18976 19048 - intron coding_transcript
6460555 6460716 19049 19210 - exon coding_transcript
6460555 6460716 19049 19210 - cds coding_transcript
6460717 6463261 19211 21755 - intron coding_transcript
6463262 6463843 21756 22337 - exon coding_transcript
6463262 6463843 21756 22337 - cds coding_transcript
6466217 6467700 24711 26194 - gene CG9531 coding_transcript
6468538 6473919 27032 32413 - gene mmy coding_transcript
6474438 6476972 32932 35466 - gene CG9536 coding_transcript
6477182 6480489 35676 38983 - gene Sec61alpha coding_transcript

Sets

Oligos

Name/Sequence Export
CG16947[16962]::S000169_fly_pretag_fwd
AGGATGTTAAACGCCGCCTGTCCCTGGTCACCGATGAACCATCCTCGGCGgaagtgcataccaatcaggacccgc
fasta Fasta
CG16947[16962]::S000169_fly_pretag_rev
CGAATATAGATGCGGATGCTGATGCTGTGGTTTGAATCGGGTGGATATCActtgtcgtcgtcatccttgtagtca
fasta Fasta