Clone: 6005613252476711 E05

Tagged gene: CG3819
Identifier: FBgn0036833

Clone FlyFos024159(pRedFlp-Hgr)(CG3819[24720]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3L
18901360 18907250 12414 18304 - gene CG14077 coding_transcript
18901360 18904282 12414 15336 - gene Ir75d coding_transcript
18910681 18912359 21735 23413 + gene CG6839 coding_transcript
18912324 18913402 23378 24456 - gene CG18223 coding_transcript
18913623 18915206 24677 27322 - gene CG3819 coding_transcript
18913623 18915206 24677 27322 - mrna FBtr0075048 coding_transcript
18913623 18914799 24677 26915 - exon coding_transcript
18913623 18913663 24677 24717 - three_prime_utr coding_transcript
18913664 18914799 24718 26915 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 24794 24827 - misc_recomb FRT CLC
2358 2429 24835 24906 - cds BLRP CLC
2337 2357 24907 24927 - cds TEV CLC
2313 2336 24928 24951 - cds Precision cut site CLC
2271 2312 24952 24993 - cds V5 CLC
1548 2264 25000 25716 - cds SGFP CLC
1482 1541 25723 25782 - cds 2xTY1 CLC
dmel-5.43-3L
18914800 18915056 26916 27172 - intron coding_transcript
18915057 18915206 27173 27322 - exon coding_transcript
18915057 18915192 27173 27308 - cds coding_transcript
18915193 18915206 27309 27322 - five_prime_utr coding_transcript
18915519 18939136 27635 51252 - gene CG32204 coding_transcript
18918190 18919208 30306 31324 + gene CG43049 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG3819[24720]::S000169_fly_pretag_fwd
GCAAGAAGGTGACGCATCTGCCCGAGTTCTCCGTCAGCGGACTGTTGGTCgaagtgcataccaatcaggacccgc
 fasta Fasta
CG3819[24720]::S000169_fly_pretag_rev
AGTGTTTCGATGTAAAGGTATTATTTATTATTTCAAACATAACCAGTTTActtgtcgtcgtcatccttgtagtca
 fasta Fasta