Clone: 13820775239620986 F12
Tagged gene: CG10417
Identifier: FBgn0033021
Clone | FlyFos024110(pRedFlp-Hgr)(CG10417[33410]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2R | ||||||||
1247831 | 1250608 | 30898 | 34737 | + | gene | CG10417 | coding_transcript | |
1247831 | 1250608 | 30898 | 34737 | + | mrna | FBtr0086091 | coding_transcript | |
1250335 | 1250608 | 30898 | 31171 | + | exon | coding_transcript | ||
1250335 | 1250608 | 30898 | 31171 | + | five_prime_utr | coding_transcript | ||
1247831 | 1250605 | 30901 | 34737 | + | mrna | FBtr0086092 | coding_transcript | |
1250568 | 1250605 | 30901 | 30938 | + | exon | coding_transcript | ||
1250568 | 1250605 | 30901 | 30938 | + | five_prime_utr | coding_transcript | ||
1250391 | 1250567 | 30939 | 31115 | + | intron | coding_transcript | ||
1250335 | 1250390 | 31116 | 31171 | + | exon | coding_transcript | ||
1250335 | 1250390 | 31116 | 31171 | + | five_prime_utr | coding_transcript | ||
1250261 | 1250334 | 31172 | 31245 | + | intron | coding_transcript | ||
1250261 | 1250334 | 31172 | 31245 | + | intron | coding_transcript | ||
1250133 | 1250260 | 31246 | 31373 | + | exon | coding_transcript | ||
1250133 | 1250260 | 31246 | 31373 | + | exon | coding_transcript | ||
1250244 | 1250260 | 31246 | 31262 | + | five_prime_utr | coding_transcript | ||
1250244 | 1250260 | 31246 | 31262 | + | five_prime_utr | coding_transcript | ||
1250133 | 1250243 | 31263 | 31373 | + | cds | coding_transcript | ||
1250133 | 1250243 | 31263 | 31373 | + | cds | coding_transcript | ||
1250073 | 1250132 | 31374 | 31433 | + | intron | coding_transcript | ||
1250073 | 1250132 | 31374 | 31433 | + | intron | coding_transcript | ||
1249104 | 1250072 | 31434 | 32402 | + | exon | coding_transcript | ||
1249104 | 1250072 | 31434 | 32402 | + | cds | coding_transcript | ||
1249104 | 1250072 | 31434 | 32402 | + | exon | coding_transcript | ||
1249104 | 1250072 | 31434 | 32402 | + | cds | coding_transcript | ||
1249055 | 1249103 | 32403 | 32451 | + | intron | coding_transcript | ||
1249055 | 1249103 | 32403 | 32451 | + | intron | coding_transcript | ||
1248524 | 1249054 | 32452 | 32982 | + | exon | coding_transcript | ||
1248524 | 1249054 | 32452 | 32982 | + | cds | coding_transcript | ||
1248524 | 1249054 | 32452 | 32982 | + | exon | coding_transcript | ||
1248524 | 1249054 | 32452 | 32982 | + | cds | coding_transcript | ||
1248471 | 1248523 | 32983 | 33035 | + | intron | coding_transcript | ||
1248471 | 1248523 | 32983 | 33035 | + | intron | coding_transcript | ||
1247831 | 1248470 | 33036 | 34737 | + | exon | coding_transcript | ||
1247831 | 1248470 | 33036 | 34737 | + | exon | coding_transcript | ||
1248093 | 1248470 | 33036 | 34475 | + | cds | coding_transcript | ||
1248093 | 1248470 | 33036 | 34475 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 33411 | 33470 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 33477 | 34193 | + | cds | SGFP | CLC | |
2271 | 2312 | 34200 | 34241 | + | cds | V5 | CLC | |
2313 | 2336 | 34242 | 34265 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 34266 | 34286 | + | cds | TEV | CLC | |
2358 | 2429 | 34287 | 34358 | + | cds | BLRP | CLC | |
3813 | 3846 | 34366 | 34399 | + | misc_recomb | FRT | CLC | |
dmel-5.43-2R | ||||||||
1247831 | 1248092 | 34476 | 34737 | + | three_prime_utr | coding_transcript | ||
1247831 | 1248092 | 34476 | 34737 | + | three_prime_utr | coding_transcript | ||
1241499 | 1242231 | 40337 | 41069 | - | gene | CG10396 | coding_transcript | |
1239218 | 1239627 | 42941 | 43350 | + | gene | CG30441 | coding_transcript | |
1237998 | 1239477 | 43091 | 44570 | - | gene | CG10395 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG10417[33410]::S000169_fly_pretag_rev
CGATTAAATGTGAATTAAGATGAGTGCACTTCCGAATGTCAAGTAAATTActtgtcgtcgtcatccttgtagtca
|
Fasta |
CG10417[33410]::S000169_fly_pretag_fwd
ACCCTACCCAGAAGGCCATTAAGGAAGTTACTATAATTGTTTCTTCATCGgaagtgcataccaatcaggacccgc
|
Fasta |