Clone: 13820775239620986 C11

Tagged gene: CG13933
Identifier: FBgn0035270

Clone FlyFos024091(pRedFlp-Hgr)(CG13933[18250]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3L
1771809 1775143 17455 21851 - gene CG13933 coding_transcript
1771809 1775143 17455 21851 - mrna FBtr0072792 coding_transcript
1771809 1773369 17455 20077 - exon coding_transcript
1771809 1772601 17455 18247 - three_prime_utr coding_transcript
1772602 1773369 18248 20077 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 18324 18357 - misc_recomb FRT CLC
2358 2429 18365 18436 - cds BLRP CLC
2337 2357 18437 18457 - cds TEV CLC
2313 2336 18458 18481 - cds Precision cut site CLC
2271 2312 18482 18523 - cds V5 CLC
1548 2264 18530 19246 - cds SGFP CLC
1482 1541 19253 19312 - cds 2xTY1 CLC
dmel-5.43-3L
1773370 1773422 20078 20130 - intron coding_transcript
1773423 1773526 20131 20234 - exon coding_transcript
1773423 1773526 20131 20234 - cds coding_transcript
1773527 1773577 20235 20285 - intron coding_transcript
1773578 1773910 20286 20618 - exon coding_transcript
1773578 1773910 20286 20618 - cds coding_transcript
1773911 1773980 20619 20688 - intron coding_transcript
1773981 1775143 20689 21851 - exon coding_transcript
1773981 1774791 20689 21499 - cds coding_transcript
1774792 1775143 21500 21851 - five_prime_utr coding_transcript
1775633 1777024 22341 23732 + gene CG12018 coding_transcript
1777008 1777363 23716 24071 - gene CG2021 coding_transcript
1777441 1778347 24149 25055 + gene mRpL46 coding_transcript
1779111 1795319 25819 42027 - gene alpha-Spec coding_transcript
1789625 1795318 36333 42026 - gene dlt coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG13933[18250]::S000169_fly_pretag_fwd
GCCTGAACCTGCCGGGCCCGCTCAAAGACTACGTGCTGCAGTTCGAGAGGgaagtgcataccaatcaggacccgc
fasta Fasta
CG13933[18250]::S000169_fly_pretag_rev
TAGTTCGCTGCGGTTGGGATTCATTGGTCCTTCGGCCGCTCCACTCGCTActtgtcgtcgtcatccttgtagtca
fasta Fasta