Clone: 13820775239620986 H10

Tagged gene: sca
Identifier: FBgn0003326

Clone FlyFos024078(pRedFlp-Hgr)(sca[41956]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]
Whole tag sequencing full download [show/hide details]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2R
8668049 8689515 21567 44095 + gene sca coding_transcript
8668049 8689515 21567 44095 + mrna FBtr0087856 coding_transcript
8668049 8688595 21567 43175 + mrna FBtr0087855 coding_transcript
8668049 8668897 21567 22415 + exon coding_transcript
8668049 8668897 21567 22415 + exon coding_transcript
8668049 8668367 21567 21885 + five_prime_utr coding_transcript
8668049 8668367 21567 21885 + five_prime_utr coding_transcript
8668368 8668897 21886 22415 + cds coding_transcript
8668368 8668897 21886 22415 + cds coding_transcript
8668898 8671853 22416 25371 + intron coding_transcript
8668898 8671853 22416 25371 + intron coding_transcript
8671854 8672247 25372 25765 + exon coding_transcript
8671854 8672247 25372 25765 + cds coding_transcript
8671854 8672247 25372 25765 + exon coding_transcript
8671854 8672247 25372 25765 + cds coding_transcript
8672248 8686764 25766 40282 + intron coding_transcript
8672248 8686764 25766 40282 + intron coding_transcript
8686765 8687295 40283 40813 + exon coding_transcript
8686765 8687295 40283 40813 + cds coding_transcript
8686765 8687295 40283 40813 + exon coding_transcript
8686765 8687295 40283 40813 + cds coding_transcript
8687296 8687496 40814 41014 + intron coding_transcript
8687296 8687496 40814 41014 + intron coding_transcript
8687497 8689515 41015 44095 + exon coding_transcript
8687497 8688595 41015 43175 + exon coding_transcript
8687497 8688441 41015 43021 + cds coding_transcript
8687497 8688441 41015 43021 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 41957 42016 + cds 2xTY1 CLC
1548 2264 42023 42739 + cds SGFP CLC
2271 2312 42746 42787 + cds V5 CLC
2313 2336 42788 42811 + cds Precision cut site CLC
2337 2357 42812 42832 + cds TEV CLC
2358 2429 42833 42904 + cds BLRP CLC
3813 3846 42912 42945 + misc_recomb FRT CLC
dmel-5.43-2R
8688442 8689515 43022 44095 + three_prime_utr coding_transcript
8688442 8688595 43022 43175 + three_prime_utr coding_transcript
8694182 8695316 48762 49896 + gene CG17580 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
sca[41956]::S000169_fly_pretag_rev
ACTGTAGCGGTTTTCATTCCCTCGCTTTAACGGCGGGATCAGCTCACTTActtgtcgtcgtcatccttgtagtca
fasta Fasta
sca[41956]::S000169_fly_pretag_fwd
CGCCGAAAACCAACAACAGTGTGGTCCAGTTCGTGGCCGCCGGGCAGGCGgaagtgcataccaatcaggacccgc
fasta Fasta