Clone: 13820775239620986 H08

Tagged gene: GAPsec
Identifier: FBgn0035916

Clone FlyFos024050(pRedFlp-Hgr)(GAPsec[27461]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3L
8597757 8610174 9872 22289 + gene CG6282 coding_transcript
8610335 8612574 22450 24689 + gene S-Lap1 coding_transcript
8612988 8615191 25103 27306 + gene S-Lap2 coding_transcript
8615139 8616990 27254 30167 - gene GAPsec coding_transcript
8615139 8616990 27254 30167 - mrna FBtr0076648 coding_transcript
8615139 8615458 27254 28635 - exon coding_transcript
8615139 8615343 27254 27458 - three_prime_utr coding_transcript
8615344 8615458 27459 28635 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 27535 27568 - misc_recomb FRT CLC
2358 2429 27576 27647 - cds BLRP CLC
2337 2357 27648 27668 - cds TEV CLC
2313 2336 27669 27692 - cds Precision cut site CLC
2271 2312 27693 27734 - cds V5 CLC
1548 2264 27741 28457 - cds SGFP CLC
1482 1541 28464 28523 - cds 2xTY1 CLC
dmel-5.43-3L
8615459 8615510 28636 28687 - intron coding_transcript
8615511 8616034 28688 29211 - exon coding_transcript
8615511 8616034 28688 29211 - cds coding_transcript
8616035 8616176 29212 29353 - intron coding_transcript
8616177 8616649 29354 29826 - exon coding_transcript
8616177 8616649 29354 29826 - cds coding_transcript
8616650 8616707 29827 29884 - intron coding_transcript
8616708 8616787 29885 29964 - exon coding_transcript
8616708 8616787 29885 29964 - cds coding_transcript
8616788 8616854 29965 30031 - intron coding_transcript
8616855 8616990 30032 30167 - exon coding_transcript
8616855 8616874 30032 30051 - cds coding_transcript
8616875 8616990 30052 30167 - five_prime_utr coding_transcript
8624609 8627181 37786 40358 - gene Cdc6 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
GAPsec[27461]::S000169_fly_pretag_fwd
ATCCGCCAATTGACATTAATGTTGTGATTGCTCATGCCGGATCATTGGCGgaagtgcataccaatcaggacccgc
fasta Fasta
GAPsec[27461]::S000169_fly_pretag_rev
GGGGCTTTGCAAGCATTTGGGCACAAGGATATATTTCTGGAGGAATGCTActtgtcgtcgtcatccttgtagtca
fasta Fasta