Clone: 13820775239620986 B06

Tagged gene: T-cp1
Identifier: FBgn0003676

Clone FlyFos024001(pRedFlp-Hgr)(T-cp1[20064]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
18312921 18313832 17958 18869 + gene CG7048 coding_transcript
18313753 18314677 18790 19714 - gene CG5376 coding_transcript
18314807 18317153 19844 23252 - gene T-cp1 coding_transcript
18314807 18317153 19844 23252 - mrna FBtr0084290 coding_transcript
18314807 18317153 19844 23252 - mrna FBtr0084291 coding_transcript
18314807 18315580 19844 21679 - exon coding_transcript
18314807 18315580 19844 21679 - exon coding_transcript
18314807 18315024 19844 20061 - three_prime_utr coding_transcript
18314807 18315024 19844 20061 - three_prime_utr coding_transcript
18315025 18315580 20062 21679 - cds coding_transcript
18315025 18315580 20062 21679 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 20138 20171 - misc_recomb FRT CLC
2358 2429 20179 20250 - cds BLRP CLC
2337 2357 20251 20271 - cds TEV CLC
2313 2336 20272 20295 - cds Precision cut site CLC
2271 2312 20296 20337 - cds V5 CLC
1548 2264 20344 21060 - cds SGFP CLC
1482 1541 21067 21126 - cds 2xTY1 CLC
dmel-5.43-3R
18315581 18315643 21680 21742 - intron coding_transcript
18315581 18315643 21680 21742 - intron coding_transcript
18315644 18316534 21743 22633 - exon coding_transcript
18315644 18316534 21743 22633 - cds coding_transcript
18315644 18316534 21743 22633 - exon coding_transcript
18315644 18316534 21743 22633 - cds coding_transcript
18316535 18316589 22634 22688 - intron coding_transcript
18316535 18316589 22634 22688 - intron coding_transcript
18316590 18316743 22689 22842 - exon coding_transcript
18316590 18316743 22689 22842 - cds coding_transcript
18316590 18316743 22689 22842 - exon coding_transcript
18316590 18316743 22689 22842 - cds coding_transcript
18316744 18316980 22843 23079 - intron coding_transcript
18316744 18316980 22843 23079 - intron coding_transcript
18316981 18317153 23080 23252 - exon coding_transcript
18316981 18317073 23080 23172 - exon coding_transcript
18316981 18317053 23080 23152 - cds coding_transcript
18316981 18317053 23080 23152 - cds coding_transcript
18317054 18317153 23153 23252 - five_prime_utr coding_transcript
18317054 18317073 23153 23172 - five_prime_utr coding_transcript
18317074 18317137 23173 23236 - intron coding_transcript
18317138 18317153 23237 23252 - exon coding_transcript
18317138 18317153 23237 23252 - five_prime_utr coding_transcript
18317551 18318108 23650 24207 + gene CG7045 coding_transcript
18318731 18319468 24830 25567 + gene CG7046 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
T-cp1[20064]::S000169_fly_pretag_rev
GCCTAAACAAGATAGAAGAAATGTGCTTCGCTCGCGGTGAAGAATGTCTActtgtcgtcgtcatccttgtagtca
fasta Fasta
T-cp1[20064]::S000169_fly_pretag_fwd
AGAGCGGCAAGAGTTACGCCGATGCATGCGCTGCCGGCGAGCTGGACGGTgaagtgcataccaatcaggacccgc
fasta Fasta