Clone: 13820775239620986 A06

Tagged gene: CG5376
Identifier: FBgn0038977

Clone FlyFos024001(pRedFlp-Hgr)(CG5376[18843]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
18312921 18313832 17958 19931 + gene CG7048 coding_transcript
18313753 18314677 18790 20776 - gene CG5376 coding_transcript
18313753 18314677 18790 20776 - mrna FBtr0084292 coding_transcript
18313753 18313872 18790 19971 - exon coding_transcript
18313753 18313803 18790 18840 - three_prime_utr coding_transcript
18313804 18313872 18841 19971 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 18917 18950 - misc_recomb FRT CLC
2358 2429 18958 19029 - cds BLRP CLC
2337 2357 19030 19050 - cds TEV CLC
2313 2336 19051 19074 - cds Precision cut site CLC
2271 2312 19075 19116 - cds V5 CLC
1548 2264 19123 19839 - cds SGFP CLC
1482 1541 19846 19905 - cds 2xTY1 CLC
dmel-5.43-3R
18313873 18313932 19972 20031 - intron coding_transcript
18313933 18314355 20032 20454 - exon coding_transcript
18313933 18314355 20032 20454 - cds coding_transcript
18314356 18314406 20455 20505 - intron coding_transcript
18314407 18314677 20506 20776 - exon coding_transcript
18314407 18314604 20506 20703 - cds coding_transcript
18314605 18314677 20704 20776 - five_prime_utr coding_transcript
18314807 18317153 20906 23252 - gene T-cp1 coding_transcript
18317551 18318108 23650 24207 + gene CG7045 coding_transcript
18318731 18319468 24830 25567 + gene CG7046 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG5376[18843]::S000169_fly_pretag_fwd
ACGAGCAGAAGGTCAAGGTTCTCACCAAGGCTTTGGCAGAAGCCAAGAAAgaagtgcataccaatcaggacccgc
fasta Fasta
CG5376[18843]::S000169_fly_pretag_rev
TAACGAGATGTGTGCATTTAATTAACGTAGTTTATTAAATTGTTCAGCTActtgtcgtcgtcatccttgtagtca
fasta Fasta