Clone: 13820775239620986 G04
Tagged gene: Top1
Identifier: FBgn0004924
Clone | FlyFos023991(pRedFlp-Hgr)(Top1[23251]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-X | ||||||||
15213525 | 15222062 | 16828 | 26427 | + | gene | Top1 | coding_transcript | |
15213525 | 15222062 | 16828 | 26427 | + | mrna | FBtr0074005 | coding_transcript | |
15213525 | 15222062 | 16828 | 26427 | + | mrna | FBtr0100294 | coding_transcript | |
15213525 | 15213840 | 16828 | 17143 | + | exon | coding_transcript | ||
15213525 | 15213840 | 16828 | 17143 | + | exon | coding_transcript | ||
15213525 | 15213813 | 16828 | 17116 | + | five_prime_utr | coding_transcript | ||
15213525 | 15213813 | 16828 | 17116 | + | five_prime_utr | coding_transcript | ||
15213814 | 15213840 | 17117 | 17143 | + | cds | coding_transcript | ||
15213814 | 15213840 | 17117 | 17143 | + | cds | coding_transcript | ||
15213841 | 15215186 | 17144 | 18489 | + | intron | coding_transcript | ||
15213841 | 15215186 | 17144 | 18489 | + | intron | coding_transcript | ||
15214402 | 15220992 | 17705 | 25357 | + | mrna | FBtr0308699 | coding_transcript | |
15214402 | 15215065 | 17705 | 18368 | + | exon | coding_transcript | ||
15214402 | 15215050 | 17705 | 18353 | + | five_prime_utr | coding_transcript | ||
15215051 | 15215065 | 18354 | 18368 | + | cds | coding_transcript | ||
15215066 | 15215186 | 18369 | 18489 | + | intron | coding_transcript | ||
15215187 | 15215404 | 18490 | 18707 | + | exon | coding_transcript | ||
15215187 | 15215404 | 18490 | 18707 | + | cds | coding_transcript | ||
15215187 | 15215404 | 18490 | 18707 | + | exon | coding_transcript | ||
15215187 | 15215404 | 18490 | 18707 | + | cds | coding_transcript | ||
15215187 | 15215404 | 18490 | 18707 | + | exon | coding_transcript | ||
15215187 | 15215404 | 18490 | 18707 | + | cds | coding_transcript | ||
15215405 | 15215893 | 18708 | 19196 | + | intron | coding_transcript | ||
15215405 | 15215893 | 18708 | 19196 | + | intron | coding_transcript | ||
15215405 | 15215893 | 18708 | 19196 | + | intron | coding_transcript | ||
15215894 | 15216860 | 19197 | 20163 | + | exon | coding_transcript | ||
15215894 | 15216860 | 19197 | 20163 | + | cds | coding_transcript | ||
15215894 | 15216860 | 19197 | 20163 | + | exon | coding_transcript | ||
15215894 | 15216860 | 19197 | 20163 | + | cds | coding_transcript | ||
15215894 | 15216860 | 19197 | 20163 | + | exon | coding_transcript | ||
15215894 | 15216860 | 19197 | 20163 | + | cds | coding_transcript | ||
15216861 | 15216931 | 20164 | 20234 | + | intron | coding_transcript | ||
15216861 | 15216931 | 20164 | 20234 | + | intron | coding_transcript | ||
15216861 | 15216931 | 20164 | 20234 | + | intron | coding_transcript | ||
15216879 | 15220564 | 20182 | 24929 | + | mrna | FBtr0074006 | coding_transcript | |
15216879 | 15217008 | 20182 | 20311 | + | exon | coding_transcript | ||
15216879 | 15216898 | 20182 | 20201 | + | five_prime_utr | coding_transcript | ||
15216899 | 15217008 | 20202 | 20311 | + | cds | coding_transcript | ||
15216932 | 15217008 | 20235 | 20311 | + | exon | coding_transcript | ||
15216932 | 15217008 | 20235 | 20311 | + | cds | coding_transcript | ||
15216932 | 15217008 | 20235 | 20311 | + | exon | coding_transcript | ||
15216932 | 15217008 | 20235 | 20311 | + | cds | coding_transcript | ||
15216932 | 15217008 | 20235 | 20311 | + | exon | coding_transcript | ||
15216932 | 15217008 | 20235 | 20311 | + | cds | coding_transcript | ||
15217009 | 15218103 | 20312 | 21406 | + | intron | coding_transcript | ||
15217009 | 15218103 | 20312 | 21406 | + | intron | coding_transcript | ||
15217009 | 15218103 | 20312 | 21406 | + | intron | coding_transcript | ||
15217009 | 15218103 | 20312 | 21406 | + | intron | coding_transcript | ||
15218104 | 15219233 | 21407 | 22536 | + | exon | coding_transcript | ||
15218104 | 15219233 | 21407 | 22536 | + | cds | coding_transcript | ||
15218104 | 15219233 | 21407 | 22536 | + | exon | coding_transcript | ||
15218104 | 15219233 | 21407 | 22536 | + | cds | coding_transcript | ||
15218104 | 15219233 | 21407 | 22536 | + | exon | coding_transcript | ||
15218104 | 15219233 | 21407 | 22536 | + | cds | coding_transcript | ||
15218104 | 15219233 | 21407 | 22536 | + | exon | coding_transcript | ||
15218104 | 15219233 | 21407 | 22536 | + | cds | coding_transcript | ||
15219234 | 15219307 | 22537 | 22610 | + | intron | coding_transcript | ||
15219234 | 15219307 | 22537 | 22610 | + | intron | coding_transcript | ||
15219234 | 15219307 | 22537 | 22610 | + | intron | coding_transcript | ||
15219234 | 15219307 | 22537 | 22610 | + | intron | coding_transcript | ||
15219308 | 15219558 | 22611 | 22861 | + | exon | coding_transcript | ||
15219308 | 15219558 | 22611 | 22861 | + | cds | coding_transcript | ||
15219308 | 15219558 | 22611 | 22861 | + | exon | coding_transcript | ||
15219308 | 15219558 | 22611 | 22861 | + | cds | coding_transcript | ||
15219308 | 15219558 | 22611 | 22861 | + | exon | coding_transcript | ||
15219308 | 15219558 | 22611 | 22861 | + | cds | coding_transcript | ||
15219308 | 15219558 | 22611 | 22861 | + | exon | coding_transcript | ||
15219308 | 15219558 | 22611 | 22861 | + | cds | coding_transcript | ||
15219559 | 15219619 | 22862 | 22922 | + | intron | coding_transcript | ||
15219559 | 15219619 | 22862 | 22922 | + | intron | coding_transcript | ||
15219559 | 15219619 | 22862 | 22922 | + | intron | coding_transcript | ||
15219559 | 15219619 | 22862 | 22922 | + | intron | coding_transcript | ||
15219620 | 15219771 | 22923 | 23074 | + | exon | coding_transcript | ||
15219620 | 15219771 | 22923 | 23074 | + | cds | coding_transcript | ||
15219620 | 15219771 | 22923 | 23074 | + | exon | coding_transcript | ||
15219620 | 15219771 | 22923 | 23074 | + | cds | coding_transcript | ||
15219620 | 15219771 | 22923 | 23074 | + | exon | coding_transcript | ||
15219620 | 15219771 | 22923 | 23074 | + | cds | coding_transcript | ||
15219620 | 15219771 | 22923 | 23074 | + | exon | coding_transcript | ||
15219620 | 15219771 | 22923 | 23074 | + | cds | coding_transcript | ||
15219772 | 15219848 | 23075 | 23151 | + | intron | coding_transcript | ||
15219772 | 15219848 | 23075 | 23151 | + | intron | coding_transcript | ||
15219772 | 15219848 | 23075 | 23151 | + | intron | coding_transcript | ||
15219772 | 15219848 | 23075 | 23151 | + | intron | coding_transcript | ||
15219849 | 15222062 | 23152 | 26427 | + | exon | coding_transcript | ||
15219849 | 15220992 | 23152 | 25357 | + | exon | coding_transcript | ||
15219849 | 15220564 | 23152 | 24929 | + | exon | coding_transcript | ||
15219849 | 15219992 | 23152 | 24357 | + | exon | coding_transcript | ||
15219849 | 15219951 | 23152 | 24316 | + | cds | coding_transcript | ||
15219849 | 15219951 | 23152 | 24316 | + | cds | coding_transcript | ||
15219849 | 15219951 | 23152 | 24316 | + | cds | coding_transcript | ||
15219849 | 15219951 | 23152 | 24316 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 23252 | 23311 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 23318 | 24034 | + | cds | SGFP | CLC | |
2271 | 2312 | 24041 | 24082 | + | cds | V5 | CLC | |
2313 | 2336 | 24083 | 24106 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 24107 | 24127 | + | cds | TEV | CLC | |
2358 | 2429 | 24128 | 24199 | + | cds | BLRP | CLC | |
3813 | 3846 | 24207 | 24240 | + | misc_recomb | FRT | CLC | |
dmel-5.43-X | ||||||||
15219952 | 15222062 | 24317 | 26427 | + | three_prime_utr | coding_transcript | ||
15219952 | 15220992 | 24317 | 25357 | + | three_prime_utr | coding_transcript | ||
15219952 | 15220564 | 24317 | 24929 | + | three_prime_utr | coding_transcript | ||
15219952 | 15219992 | 24317 | 24357 | + | three_prime_utr | coding_transcript | ||
15219993 | 15220377 | 24358 | 24742 | + | intron | coding_transcript | ||
15220378 | 15222062 | 24743 | 26427 | + | exon | coding_transcript | ||
15220378 | 15222062 | 24743 | 26427 | + | three_prime_utr | coding_transcript | ||
15222379 | 15225035 | 26744 | 29400 | + | gene | dah | coding_transcript | |
15224817 | 15227034 | 29182 | 31399 | - | gene | CG9114 | coding_transcript | |
15227343 | 15234393 | 31708 | 38758 | + | gene | HDAC6 | coding_transcript | |
15234406 | 15236144 | 38771 | 40509 | - | gene | CG9123 | coding_transcript | |
15236890 | 15238654 | 41255 | 43019 | - | gene | CG12608 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
Top1[23251]::S000169_fly_pretag_rev
GCGTACTTGTGTGTTTGTGTCTAGGCGTGGCTGTGAGGAGAACCCATTTActtgtcgtcgtcatccttgtagtca
|
Fasta |
Top1[23251]::S000169_fly_pretag_fwd
GAACCAAATTTCTGTGGGCCGTTCATATGGCCGATGAGAATTATCGTTTCgaagtgcataccaatcaggacccgc
|
Fasta |