Clone: 13820775239620986 C03

Tagged gene: Rph
Identifier: FBgn0030230

Clone FlyFos023955(pRedFlp-Hgr)(Rph[38815]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-X
10662570 10665736 16906 20072 - gene CG1826 coding_transcript
10658911 10662368 20274 23731 + gene Atg8a coding_transcript
10654081 10658269 24373 28561 + gene Tango5 coding_transcript
10643110 10651699 30943 40594 + gene Rph coding_transcript
10643110 10651699 30943 40594 + mrna FBtr0071502 coding_transcript
10643110 10651699 30943 40594 + mrna FBtr0301558 coding_transcript
10651428 10651699 30943 31214 + exon coding_transcript
10651428 10651699 30943 31214 + exon coding_transcript
10651428 10651699 30943 31214 + five_prime_utr coding_transcript
10651505 10651699 30943 31137 + five_prime_utr coding_transcript
10651428 10651504 31138 31214 + cds coding_transcript
10647710 10651427 31215 34932 + intron coding_transcript
10647710 10651427 31215 34932 + intron coding_transcript
10647246 10647709 34933 35396 + exon coding_transcript
10647246 10647709 34933 35396 + cds coding_transcript
10647246 10647709 34933 35396 + exon coding_transcript
10647246 10647709 34933 35396 + five_prime_utr coding_transcript
10645816 10647245 35397 36826 + intron coding_transcript
10646529 10647245 35397 36113 + intron coding_transcript
10646361 10646528 36114 36281 + exon coding_transcript
10646361 10646528 36114 36281 + five_prime_utr coding_transcript
10646283 10646360 36282 36359 + intron coding_transcript
10645936 10646282 36360 36706 + exon coding_transcript
10645936 10646282 36360 36706 + five_prime_utr coding_transcript
10645816 10645935 36707 36826 + intron coding_transcript
10644959 10645815 36827 37683 + exon coding_transcript
10644959 10645815 36827 37683 + cds coding_transcript
10644959 10645815 36827 37683 + exon coding_transcript
10645646 10645815 36827 36996 + five_prime_utr coding_transcript
10644959 10645645 36997 37683 + cds coding_transcript
10644404 10644958 37684 38238 + intron coding_transcript
10644404 10644958 37684 38238 + intron coding_transcript
10644189 10644403 38239 38453 + exon coding_transcript
10644189 10644403 38239 38453 + cds coding_transcript
10644189 10644403 38239 38453 + exon coding_transcript
10644189 10644403 38239 38453 + cds coding_transcript
10644128 10644188 38454 38514 + intron coding_transcript
10644128 10644188 38454 38514 + intron coding_transcript
10643110 10644127 38515 40594 + exon coding_transcript
10643110 10644127 38515 40594 + exon coding_transcript
10643824 10644127 38515 39880 + cds coding_transcript
10643824 10644127 38515 39880 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 38816 38875 + cds 2xTY1 CLC
1548 2264 38882 39598 + cds SGFP CLC
2271 2312 39605 39646 + cds V5 CLC
2313 2336 39647 39670 + cds Precision cut site CLC
2337 2357 39671 39691 + cds TEV CLC
2358 2429 39692 39763 + cds BLRP CLC
3813 3846 39771 39804 + misc_recomb FRT CLC
dmel-5.43-X
10643110 10643823 39881 40594 + three_prime_utr coding_transcript
10643110 10643823 39881 40594 + three_prime_utr coding_transcript
10638539 10642839 40865 45165 - gene ras coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
Rph[38815]::S000169_fly_pretag_rev
ATCGATTGGACTGGGGATCGGTTGGCGTTGGGATCGGATGGGGCTACTCActtgtcgtcgtcatccttgtagtca
fasta Fasta
Rph[38815]::S000169_fly_pretag_fwd
ATCACTTCCACGAGAAATGGCATTGCCTCGCCCCCGACAATCCCGCCCACgaagtgcataccaatcaggacccgc
fasta Fasta