Clone: 13820775239620986 C03
Tagged gene: Rph
Identifier: FBgn0030230
Clone | FlyFos023955(pRedFlp-Hgr)(Rph[38815]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-X | ||||||||
10662570 | 10665736 | 16906 | 20072 | - | gene | CG1826 | coding_transcript | |
10658911 | 10662368 | 20274 | 23731 | + | gene | Atg8a | coding_transcript | |
10654081 | 10658269 | 24373 | 28561 | + | gene | Tango5 | coding_transcript | |
10643110 | 10651699 | 30943 | 40594 | + | gene | Rph | coding_transcript | |
10643110 | 10651699 | 30943 | 40594 | + | mrna | FBtr0071502 | coding_transcript | |
10643110 | 10651699 | 30943 | 40594 | + | mrna | FBtr0301558 | coding_transcript | |
10651428 | 10651699 | 30943 | 31214 | + | exon | coding_transcript | ||
10651428 | 10651699 | 30943 | 31214 | + | exon | coding_transcript | ||
10651428 | 10651699 | 30943 | 31214 | + | five_prime_utr | coding_transcript | ||
10651505 | 10651699 | 30943 | 31137 | + | five_prime_utr | coding_transcript | ||
10651428 | 10651504 | 31138 | 31214 | + | cds | coding_transcript | ||
10647710 | 10651427 | 31215 | 34932 | + | intron | coding_transcript | ||
10647710 | 10651427 | 31215 | 34932 | + | intron | coding_transcript | ||
10647246 | 10647709 | 34933 | 35396 | + | exon | coding_transcript | ||
10647246 | 10647709 | 34933 | 35396 | + | cds | coding_transcript | ||
10647246 | 10647709 | 34933 | 35396 | + | exon | coding_transcript | ||
10647246 | 10647709 | 34933 | 35396 | + | five_prime_utr | coding_transcript | ||
10645816 | 10647245 | 35397 | 36826 | + | intron | coding_transcript | ||
10646529 | 10647245 | 35397 | 36113 | + | intron | coding_transcript | ||
10646361 | 10646528 | 36114 | 36281 | + | exon | coding_transcript | ||
10646361 | 10646528 | 36114 | 36281 | + | five_prime_utr | coding_transcript | ||
10646283 | 10646360 | 36282 | 36359 | + | intron | coding_transcript | ||
10645936 | 10646282 | 36360 | 36706 | + | exon | coding_transcript | ||
10645936 | 10646282 | 36360 | 36706 | + | five_prime_utr | coding_transcript | ||
10645816 | 10645935 | 36707 | 36826 | + | intron | coding_transcript | ||
10644959 | 10645815 | 36827 | 37683 | + | exon | coding_transcript | ||
10644959 | 10645815 | 36827 | 37683 | + | cds | coding_transcript | ||
10644959 | 10645815 | 36827 | 37683 | + | exon | coding_transcript | ||
10645646 | 10645815 | 36827 | 36996 | + | five_prime_utr | coding_transcript | ||
10644959 | 10645645 | 36997 | 37683 | + | cds | coding_transcript | ||
10644404 | 10644958 | 37684 | 38238 | + | intron | coding_transcript | ||
10644404 | 10644958 | 37684 | 38238 | + | intron | coding_transcript | ||
10644189 | 10644403 | 38239 | 38453 | + | exon | coding_transcript | ||
10644189 | 10644403 | 38239 | 38453 | + | cds | coding_transcript | ||
10644189 | 10644403 | 38239 | 38453 | + | exon | coding_transcript | ||
10644189 | 10644403 | 38239 | 38453 | + | cds | coding_transcript | ||
10644128 | 10644188 | 38454 | 38514 | + | intron | coding_transcript | ||
10644128 | 10644188 | 38454 | 38514 | + | intron | coding_transcript | ||
10643110 | 10644127 | 38515 | 40594 | + | exon | coding_transcript | ||
10643110 | 10644127 | 38515 | 40594 | + | exon | coding_transcript | ||
10643824 | 10644127 | 38515 | 39880 | + | cds | coding_transcript | ||
10643824 | 10644127 | 38515 | 39880 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 38816 | 38875 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 38882 | 39598 | + | cds | SGFP | CLC | |
2271 | 2312 | 39605 | 39646 | + | cds | V5 | CLC | |
2313 | 2336 | 39647 | 39670 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 39671 | 39691 | + | cds | TEV | CLC | |
2358 | 2429 | 39692 | 39763 | + | cds | BLRP | CLC | |
3813 | 3846 | 39771 | 39804 | + | misc_recomb | FRT | CLC | |
dmel-5.43-X | ||||||||
10643110 | 10643823 | 39881 | 40594 | + | three_prime_utr | coding_transcript | ||
10643110 | 10643823 | 39881 | 40594 | + | three_prime_utr | coding_transcript | ||
10638539 | 10642839 | 40865 | 45165 | - | gene | ras | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
Rph[38815]::S000169_fly_pretag_rev
ATCGATTGGACTGGGGATCGGTTGGCGTTGGGATCGGATGGGGCTACTCActtgtcgtcgtcatccttgtagtca
|
Fasta |
Rph[38815]::S000169_fly_pretag_fwd
ATCACTTCCACGAGAAATGGCATTGCCTCGCCCCCGACAATCCCGCCCACgaagtgcataccaatcaggacccgc
|
Fasta |