Clone: 2081450050271747 B12

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Export Fasta GenBank GFF

Validation(click to hide details)

Type	Status	Download / View
Grows in selection	good

Genes in pFlyFos vector(click to hide details)

Gene		Clone relative			Genome relative
Name	Length	Start	End	Strand	Start	End	Strand
DsRed	716	8417	9132	+	8417	9132	+

Features(click to show details)

Start (Source)	End (Source)	Start	End	Strand	Type	Name	Source
pFlyFos
1	107	1	107	-	cds	LacZ	epicentre
4	21	4	21	-	primer_bind	CC2_rev	epicentre
310	593	310	593	+	misc_recomb	attB	epicentre
727	1386	727	1386	-	cds	Cat	epicentre
1605	1952	1605	1952	+	cds	redF	epicentre
2336	2953	2336	2953	+	rep_origin	oriV	epicentre
2953	3007	2953	3007	+	rep_origin	ori2	epicentre
3347	4102	3347	4102	+	cds	repE	epicentre
4681	5856	4681	5856	+	cds	parA	epicentre
5856	6827	5856	6827	+	cds	parB	epicentre
6900	7417	6900	7417	+	repeat_region	parC	epicentre
7633	8031	7633	8031	+	misc_binding	cos	epicentre
8049	8082	8049	8082	+	misc_recomb	loxP	epicentre
8182	8416	8182	8416	+	promoter	3xP3	epicentre
8417	9132	8417	9132	+	gene	DsRed	epicentre
8452	9132	8452	9132	+	cds	DsRed	epicentre
9284	9334	9284	9334	+	terminator	SV40	epicentre
9408	9630	9408	9630	-	cds	LacZ	epicentre
9559	9576	9559	9576	+	primer_bind	T7	epicentre
9610	9627	9610	9627	+	primer_bind	CC2_fwd	epicentre
dmel-5.43-3L
6976573	6977686	18114	19227	+	gene	CG43439	coding_transcript
6976573	6977686	18114	19227	+	gene	CG32388	coding_transcript
6965850	6973153	22647	29950	+	gene	G-ialpha65A	coding_transcript
6964679	6965567	30233	31121	+	gene	CG10063	coding_transcript
6962711	6964766	31034	33089	-	gene	CG9953	coding_transcript
6961135	6962142	33658	34665	+	gene	Mis12	coding_transcript
6958360	6961061	34739	37440	+	gene	CG10064	coding_transcript
6952647	6957902	37898	44215	+	gene	sgl	coding_transcript
6952647	6957902	37898	44215	+	mrna	FBtr0076938	coding_transcript
6957497	6957902	37898	38303	+	exon		coding_transcript
6957647	6957902	37898	38153	+	five_prime_utr		coding_transcript
6957497	6957646	38154	38303	+	cds		coding_transcript
6955050	6957496	38304	40750	+	intron		coding_transcript
6954911	6955049	40751	40889	+	exon		coding_transcript
6954911	6955049	40751	40889	+	cds		coding_transcript
6954428	6954910	40890	41372	+	intron		coding_transcript
6952647	6954427	41373	44215	+	exon		coding_transcript
6953286	6954427	41373	43576	+	cds		coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482	1541	42512	42571	+	cds	2xTY1	CLC
1548	2264	42578	43294	+	cds	SGFP	CLC
2271	2312	43301	43342	+	cds	V5	CLC
2313	2336	43343	43366	+	cds	Precision cut site	CLC
2337	2357	43367	43387	+	cds	TEV	CLC
2358	2429	43388	43459	+	cds	BLRP	CLC
3813	3846	43467	43500	+	misc_recomb	FRT	CLC
dmel-5.43-3L
6952647	6953285	43577	44215	+	three_prime_utr		coding_transcript
6951446	6952686	44176	45416	-	gene	Surf1	coding_transcript
6950046	6951214	45648	46816	+	gene	CG10075	coding_transcript
6949251	6950540	46322	47611	-	gene	CG9948	coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence	Export
sgl[42511]::S000169_fly_pretag_rev TCGCCAACTTTAAGTGTAAATGCCACCACCTCCGCCGCCCGACGCGCCTActtgtcgtcgtcatccttgtagtca	Fasta
sgl[42511]::S000169_fly_pretag_fwd AGTACCAGCGCACCGGACTGCTCCGCTCGTGGGGCATTGTGCCGCAGCTTgaagtgcataccaatcaggacccgc	Fasta