Clone: 2081450050271747 C11

Tagged gene: dsd
Identifier: FBgn0039528

Clone FlyFos023700(pRedFlp-Hgr)(dsd[29327]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
23408527 23412098 13095 16666 + gene raps coding_transcript
23412095 23419260 16663 23828 - gene CG5639 coding_transcript
23423483 23433081 28051 38711 - gene dsd coding_transcript
23423483 23433081 28051 38711 - mrna FBtr0301390 coding_transcript
23423483 23424914 28051 30544 - exon coding_transcript
23423483 23424756 28051 29324 - three_prime_utr coding_transcript
23424757 23424914 29325 30544 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 29401 29434 - misc_recomb FRT CLC
2358 2429 29442 29513 - cds BLRP CLC
2337 2357 29514 29534 - cds TEV CLC
2313 2336 29535 29558 - cds Precision cut site CLC
2271 2312 29559 29600 - cds V5 CLC
1548 2264 29607 30323 - cds SGFP CLC
1482 1541 30330 30389 - cds 2xTY1 CLC
dmel-5.43-3R
23424915 23424978 30545 30608 - intron coding_transcript
23424979 23425060 30609 30690 - exon coding_transcript
23424979 23425060 30609 30690 - cds coding_transcript
23425061 23425213 30691 30843 - intron coding_transcript
23425214 23425300 30844 30930 - exon coding_transcript
23425214 23425300 30844 30930 - cds coding_transcript
23425301 23425361 30931 30991 - intron coding_transcript
23425362 23428191 30992 33821 - exon coding_transcript
23425362 23428191 30992 33821 - cds coding_transcript
23428192 23428519 33822 34149 - intron coding_transcript
23428520 23428667 34150 34297 - exon coding_transcript
23428520 23428667 34150 34297 - cds coding_transcript
23428668 23428735 34298 34365 - intron coding_transcript
23428736 23428893 34366 34523 - exon coding_transcript
23428736 23428893 34366 34523 - cds coding_transcript
23428894 23428972 34524 34602 - intron coding_transcript
23428973 23429209 34603 34839 - exon coding_transcript
23428973 23429209 34603 34839 - cds coding_transcript
23429210 23432490 34840 38120 - intron coding_transcript
23432491 23433081 38121 38711 - exon coding_transcript
23432491 23432762 38121 38392 - cds coding_transcript
23432763 23433081 38393 38711 - five_prime_utr coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
dsd[29327]::S000169_fly_pretag_fwd
AGGAGCCAAAGTCAAAGCGCAAGCAGAGCCAGCACCCAGACAGTTGTACAgaagtgcataccaatcaggacccgc
fasta Fasta
dsd[29327]::S000169_fly_pretag_rev
ATCGTTATCATTATTTCTTTATGTAGGTAAGCATAGTGTTACGGTTATTActtgtcgtcgtcatccttgtagtca
fasta Fasta