Clone: 2081450050271747 A06
Tagged gene: CG8112
Identifier: FBgn0037612
| Clone | FlyFos023594(pRedFlp-Hgr)(CG8112[18828]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3R | ||||||||
| 4547093 | 4548773 | 10951 | 12631 | - | gene | CG8136 | coding_transcript | |
| 4541956 | 4547050 | 12674 | 17768 | - | gene | CG8116 | coding_transcript | |
| 4544920 | 4545867 | 13857 | 14804 | - | gene | CG11760 | coding_transcript | |
| 4540922 | 4544178 | 15546 | 18802 | + | gene | Cks85A | coding_transcript | |
| 4526704 | 4540985 | 18739 | 34082 | - | gene | CG8112 | coding_transcript | |
| 4526704 | 4540985 | 18739 | 34082 | - | mrna | FBtr0081904 | coding_transcript | |
| 4538719 | 4540985 | 18739 | 22067 | - | mrna | FBtr0305337 | coding_transcript | |
| 4539868 | 4540985 | 18739 | 20918 | - | exon | coding_transcript | ||
| 4539868 | 4540985 | 18739 | 20918 | - | exon | coding_transcript | ||
| 4540899 | 4540985 | 18739 | 18825 | - | three_prime_utr | coding_transcript | ||
| 4540899 | 4540985 | 18739 | 18825 | - | three_prime_utr | coding_transcript | ||
| 4539868 | 4540898 | 18826 | 20918 | - | cds | coding_transcript | ||
| 4539868 | 4540898 | 18826 | 20918 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 18902 | 18935 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 18943 | 19014 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 19015 | 19035 | - | cds | TEV | CLC | |
| 2313 | 2336 | 19036 | 19059 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 19060 | 19101 | - | cds | V5 | CLC | |
| 1548 | 2264 | 19108 | 19824 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 19831 | 19890 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-3R | ||||||||
| 4539493 | 4539867 | 20919 | 21293 | - | intron | coding_transcript | ||
| 4539493 | 4539867 | 20919 | 21293 | - | intron | coding_transcript | ||
| 4538719 | 4539826 | 20960 | 22067 | - | mrna | FBtr0305338 | coding_transcript | |
| 4539554 | 4539826 | 20960 | 21232 | - | exon | coding_transcript | ||
| 4539562 | 4539826 | 20960 | 21224 | - | three_prime_utr | coding_transcript | ||
| 4539554 | 4539561 | 21225 | 21232 | - | cds | coding_transcript | ||
| 4539493 | 4539553 | 21233 | 21293 | - | intron | coding_transcript | ||
| 4538640 | 4539492 | 21294 | 22146 | - | exon | coding_transcript | ||
| 4538719 | 4539492 | 21294 | 22067 | - | exon | coding_transcript | ||
| 4538719 | 4539492 | 21294 | 22067 | - | exon | coding_transcript | ||
| 4538844 | 4539492 | 21294 | 21942 | - | cds | coding_transcript | ||
| 4538844 | 4539492 | 21294 | 21942 | - | cds | coding_transcript | ||
| 4538844 | 4539492 | 21294 | 21942 | - | cds | coding_transcript | ||
| 4538640 | 4538843 | 21943 | 22146 | - | five_prime_utr | coding_transcript | ||
| 4538719 | 4538843 | 21943 | 22067 | - | five_prime_utr | coding_transcript | ||
| 4538719 | 4538843 | 21943 | 22067 | - | five_prime_utr | coding_transcript | ||
| 4530225 | 4538639 | 22147 | 30561 | - | intron | coding_transcript | ||
| 4530140 | 4530224 | 30562 | 30646 | - | exon | coding_transcript | ||
| 4530140 | 4530224 | 30562 | 30646 | - | five_prime_utr | coding_transcript | ||
| 4526740 | 4530139 | 30647 | 34046 | - | intron | coding_transcript | ||
| 4526704 | 4526739 | 34047 | 34082 | - | exon | coding_transcript | ||
| 4526704 | 4526739 | 34047 | 34082 | - | five_prime_utr | coding_transcript | ||
| 4517038 | 4523540 | 37246 | 43748 | + | gene | hb | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
CG8112[18828]::S000169_fly_pretag_fwd
ACGAGAGTTGGACGTATCGCCTGCTGCCGGCGGTATGGCGCTGCTACAATgaagtgcataccaatcaggacccgc
|
Fasta
|
|
CG8112[18828]::S000169_fly_pretag_rev
GTACGCCCTGTGTACAGACAGTTTAAAAGTAGTGTTTAACTAATTGACTActtgtcgtcgtcatccttgtagtca
|
Fasta
|