Clone: 2081450050271747 H04
Tagged gene: JhI-21
Identifier: FBgn0028425
| Clone | FlyFos023577(pRedFlp-Hgr)(JhI-21[35453]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-2L | ||||||||
| 12076823 | 12077635 | 10051 | 10863 | - | gene | CG14947 | coding_transcript | |
| 12063523 | 12066772 | 20914 | 24163 | + | gene | CG14946 | coding_transcript | |
| 12058304 | 12063171 | 24515 | 29382 | + | gene | rab3-GAP | coding_transcript | |
| 12057393 | 12058251 | 29435 | 30293 | - | gene | CG34164 | coding_transcript | |
| 12056324 | 12057416 | 30270 | 31362 | - | gene | RpL7-like | coding_transcript | |
| 12051755 | 12056042 | 31644 | 36993 | + | gene | JhI-21 | coding_transcript | |
| 12051755 | 12056042 | 31644 | 36993 | + | mrna | FBtr0089656 | coding_transcript | |
| 12055902 | 12056042 | 31644 | 31784 | + | exon | coding_transcript | ||
| 12055902 | 12056042 | 31644 | 31784 | + | five_prime_utr | coding_transcript | ||
| 12051755 | 12055949 | 31737 | 36993 | + | mrna | FBtr0089655 | coding_transcript | |
| 12055902 | 12055949 | 31737 | 31784 | + | exon | coding_transcript | ||
| 12055902 | 12055949 | 31737 | 31784 | + | five_prime_utr | coding_transcript | ||
| 12055334 | 12055901 | 31785 | 32352 | + | intron | coding_transcript | ||
| 12055360 | 12055901 | 31785 | 32326 | + | intron | coding_transcript | ||
| 12051755 | 12055587 | 32099 | 36993 | + | mrna | FBtr0305089 | coding_transcript | |
| 12055480 | 12055587 | 32099 | 32206 | + | exon | coding_transcript | ||
| 12055480 | 12055587 | 32099 | 32206 | + | five_prime_utr | coding_transcript | ||
| 12055360 | 12055479 | 32207 | 32326 | + | intron | coding_transcript | ||
| 12055085 | 12055359 | 32327 | 32601 | + | exon | coding_transcript | ||
| 12055085 | 12055359 | 32327 | 32601 | + | exon | coding_transcript | ||
| 12055297 | 12055359 | 32327 | 32389 | + | five_prime_utr | coding_transcript | ||
| 12055297 | 12055359 | 32327 | 32389 | + | five_prime_utr | coding_transcript | ||
| 12055085 | 12055333 | 32353 | 32601 | + | exon | coding_transcript | ||
| 12055297 | 12055333 | 32353 | 32389 | + | five_prime_utr | coding_transcript | ||
| 12055085 | 12055296 | 32390 | 32601 | + | cds | coding_transcript | ||
| 12055085 | 12055296 | 32390 | 32601 | + | cds | coding_transcript | ||
| 12055085 | 12055296 | 32390 | 32601 | + | cds | coding_transcript | ||
| 12054499 | 12055084 | 32602 | 33187 | + | intron | coding_transcript | ||
| 12054499 | 12055084 | 32602 | 33187 | + | intron | coding_transcript | ||
| 12054499 | 12055084 | 32602 | 33187 | + | intron | coding_transcript | ||
| 12054303 | 12054498 | 33188 | 33383 | + | exon | coding_transcript | ||
| 12054303 | 12054498 | 33188 | 33383 | + | cds | coding_transcript | ||
| 12054303 | 12054498 | 33188 | 33383 | + | exon | coding_transcript | ||
| 12054303 | 12054498 | 33188 | 33383 | + | cds | coding_transcript | ||
| 12054303 | 12054498 | 33188 | 33383 | + | exon | coding_transcript | ||
| 12054303 | 12054498 | 33188 | 33383 | + | cds | coding_transcript | ||
| 12054085 | 12054302 | 33384 | 33601 | + | intron | coding_transcript | ||
| 12054085 | 12054302 | 33384 | 33601 | + | intron | coding_transcript | ||
| 12054085 | 12054302 | 33384 | 33601 | + | intron | coding_transcript | ||
| 12053982 | 12054084 | 33602 | 33704 | + | exon | coding_transcript | ||
| 12053982 | 12054084 | 33602 | 33704 | + | cds | coding_transcript | ||
| 12053982 | 12054084 | 33602 | 33704 | + | exon | coding_transcript | ||
| 12053982 | 12054084 | 33602 | 33704 | + | cds | coding_transcript | ||
| 12053982 | 12054084 | 33602 | 33704 | + | exon | coding_transcript | ||
| 12053982 | 12054084 | 33602 | 33704 | + | cds | coding_transcript | ||
| 12053925 | 12053981 | 33705 | 33761 | + | intron | coding_transcript | ||
| 12053925 | 12053981 | 33705 | 33761 | + | intron | coding_transcript | ||
| 12053925 | 12053981 | 33705 | 33761 | + | intron | coding_transcript | ||
| 12053657 | 12053924 | 33762 | 34029 | + | exon | coding_transcript | ||
| 12053657 | 12053924 | 33762 | 34029 | + | cds | coding_transcript | ||
| 12053657 | 12053924 | 33762 | 34029 | + | exon | coding_transcript | ||
| 12053657 | 12053924 | 33762 | 34029 | + | cds | coding_transcript | ||
| 12053657 | 12053924 | 33762 | 34029 | + | exon | coding_transcript | ||
| 12053657 | 12053924 | 33762 | 34029 | + | cds | coding_transcript | ||
| 12053089 | 12053656 | 34030 | 34597 | + | intron | coding_transcript | ||
| 12053089 | 12053656 | 34030 | 34597 | + | intron | coding_transcript | ||
| 12053089 | 12053656 | 34030 | 34597 | + | intron | coding_transcript | ||
| 12052764 | 12053088 | 34598 | 34922 | + | exon | coding_transcript | ||
| 12052764 | 12053088 | 34598 | 34922 | + | cds | coding_transcript | ||
| 12052764 | 12053088 | 34598 | 34922 | + | exon | coding_transcript | ||
| 12052764 | 12053088 | 34598 | 34922 | + | cds | coding_transcript | ||
| 12052764 | 12053088 | 34598 | 34922 | + | exon | coding_transcript | ||
| 12052764 | 12053088 | 34598 | 34922 | + | cds | coding_transcript | ||
| 12052685 | 12052763 | 34923 | 35001 | + | intron | coding_transcript | ||
| 12052685 | 12052763 | 34923 | 35001 | + | intron | coding_transcript | ||
| 12052685 | 12052763 | 34923 | 35001 | + | intron | coding_transcript | ||
| 12052560 | 12052684 | 35002 | 35126 | + | exon | coding_transcript | ||
| 12052560 | 12052684 | 35002 | 35126 | + | cds | coding_transcript | ||
| 12052560 | 12052684 | 35002 | 35126 | + | exon | coding_transcript | ||
| 12052560 | 12052684 | 35002 | 35126 | + | cds | coding_transcript | ||
| 12052560 | 12052684 | 35002 | 35126 | + | exon | coding_transcript | ||
| 12052560 | 12052684 | 35002 | 35126 | + | cds | coding_transcript | ||
| 12052504 | 12052559 | 35127 | 35182 | + | intron | coding_transcript | ||
| 12052504 | 12052559 | 35127 | 35182 | + | intron | coding_transcript | ||
| 12052504 | 12052559 | 35127 | 35182 | + | intron | coding_transcript | ||
| 12051755 | 12052503 | 35183 | 36993 | + | exon | coding_transcript | ||
| 12051755 | 12052503 | 35183 | 36993 | + | exon | coding_transcript | ||
| 12051755 | 12052503 | 35183 | 36993 | + | exon | coding_transcript | ||
| 12052230 | 12052503 | 35183 | 36518 | + | cds | coding_transcript | ||
| 12052230 | 12052503 | 35183 | 36518 | + | cds | coding_transcript | ||
| 12052230 | 12052503 | 35183 | 36518 | + | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 1482 | 1541 | 35454 | 35513 | + | cds | 2xTY1 | CLC | |
| 1548 | 2264 | 35520 | 36236 | + | cds | SGFP | CLC | |
| 2271 | 2312 | 36243 | 36284 | + | cds | V5 | CLC | |
| 2313 | 2336 | 36285 | 36308 | + | cds | Precision cut site | CLC | |
| 2337 | 2357 | 36309 | 36329 | + | cds | TEV | CLC | |
| 2358 | 2429 | 36330 | 36401 | + | cds | BLRP | CLC | |
| 3813 | 3846 | 36409 | 36442 | + | misc_recomb | FRT | CLC | |
| dmel-5.43-2L | ||||||||
| 12051755 | 12052229 | 36519 | 36993 | + | three_prime_utr | coding_transcript | ||
| 12051755 | 12052229 | 36519 | 36993 | + | three_prime_utr | coding_transcript | ||
| 12051755 | 12052229 | 36519 | 36993 | + | three_prime_utr | coding_transcript | ||
| 12049423 | 12052049 | 36699 | 39325 | - | gene | CG14945 | coding_transcript | |
| 12046854 | 12048918 | 39830 | 41894 | + | gene | CG6792 | coding_transcript | |
| 12045346 | 12046100 | 42648 | 43402 | + | gene | CG6770 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
JhI-21[35453]::S000169_fly_pretag_rev
ACTAAATGCATAAATTCTACGGTTGTGGTACACACATATATGTAGGCCTActtgtcgtcgtcatccttgtagtca
|
Fasta
|
|
JhI-21[35453]::S000169_fly_pretag_fwd
GCCGGGCCATCTTCAATACCACCATTATCGAATCGAATGAGGCTATTAACgaagtgcataccaatcaggacccgc
|
Fasta
|