Clone: 2081450050271747 B04
Tagged gene: CG7342
Identifier: FBgn0038716
| Clone | FlyFos023566(pRedFlp-Hgr)(CG7342[20475]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3R | ||||||||
| 15439103 | 15441506 | 10967 | 13370 | - | gene | CG16727 | coding_transcript | |
| 15435947 | 15438159 | 14314 | 16526 | - | gene | CG17752 | coding_transcript | |
| 15432976 | 15435044 | 17429 | 19497 | - | gene | CG17751 | coding_transcript | |
| 15429097 | 15432197 | 20276 | 24438 | - | gene | CG7342 | coding_transcript | |
| 15429097 | 15432197 | 20276 | 24438 | - | mrna | FBtr0083777 | coding_transcript | |
| 15429097 | 15432197 | 20276 | 24438 | - | mrna | FBtr0304745 | coding_transcript | |
| 15431567 | 15432197 | 20276 | 21968 | - | exon | coding_transcript | ||
| 15431567 | 15432197 | 20276 | 21968 | - | exon | coding_transcript | ||
| 15432001 | 15432197 | 20276 | 20472 | - | three_prime_utr | coding_transcript | ||
| 15432001 | 15432197 | 20276 | 20472 | - | three_prime_utr | coding_transcript | ||
| 15431567 | 15432000 | 20473 | 21968 | - | cds | coding_transcript | ||
| 15431567 | 15432000 | 20473 | 21968 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 20549 | 20582 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 20590 | 20661 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 20662 | 20682 | - | cds | TEV | CLC | |
| 2313 | 2336 | 20683 | 20706 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 20707 | 20748 | - | cds | V5 | CLC | |
| 1548 | 2264 | 20755 | 21471 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 21478 | 21537 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-3R | ||||||||
| 15431307 | 15431566 | 21969 | 22228 | - | intron | coding_transcript | ||
| 15431307 | 15431566 | 21969 | 22228 | - | intron | coding_transcript | ||
| 15431071 | 15431306 | 22229 | 22464 | - | exon | coding_transcript | ||
| 15431071 | 15431306 | 22229 | 22464 | - | cds | coding_transcript | ||
| 15431071 | 15431306 | 22229 | 22464 | - | exon | coding_transcript | ||
| 15431071 | 15431306 | 22229 | 22464 | - | cds | coding_transcript | ||
| 15431006 | 15431070 | 22465 | 22529 | - | intron | coding_transcript | ||
| 15431006 | 15431070 | 22465 | 22529 | - | intron | coding_transcript | ||
| 15430600 | 15431005 | 22530 | 22935 | - | exon | coding_transcript | ||
| 15430600 | 15431005 | 22530 | 22935 | - | cds | coding_transcript | ||
| 15430600 | 15431005 | 22530 | 22935 | - | exon | coding_transcript | ||
| 15430600 | 15431005 | 22530 | 22935 | - | cds | coding_transcript | ||
| 15430439 | 15430599 | 22936 | 23096 | - | intron | coding_transcript | ||
| 15430439 | 15430599 | 22936 | 23096 | - | intron | coding_transcript | ||
| 15430038 | 15430438 | 23097 | 23497 | - | exon | coding_transcript | ||
| 15430038 | 15430438 | 23097 | 23497 | - | cds | coding_transcript | ||
| 15430038 | 15430438 | 23097 | 23497 | - | exon | coding_transcript | ||
| 15430038 | 15430438 | 23097 | 23497 | - | cds | coding_transcript | ||
| 15429979 | 15430037 | 23498 | 23556 | - | intron | coding_transcript | ||
| 15429979 | 15430037 | 23498 | 23556 | - | intron | coding_transcript | ||
| 15429501 | 15429978 | 23557 | 24034 | - | exon | coding_transcript | ||
| 15429556 | 15429978 | 23557 | 23979 | - | exon | coding_transcript | ||
| 15429833 | 15429978 | 23557 | 23702 | - | cds | coding_transcript | ||
| 15429833 | 15429978 | 23557 | 23702 | - | cds | coding_transcript | ||
| 15429501 | 15429832 | 23703 | 24034 | - | five_prime_utr | coding_transcript | ||
| 15429556 | 15429832 | 23703 | 23979 | - | five_prime_utr | coding_transcript | ||
| 15429135 | 15429555 | 23980 | 24400 | - | intron | coding_transcript | ||
| 15429135 | 15429500 | 24035 | 24400 | - | intron | coding_transcript | ||
| 15429097 | 15429134 | 24401 | 24438 | - | exon | coding_transcript | ||
| 15429097 | 15429134 | 24401 | 24438 | - | five_prime_utr | coding_transcript | ||
| 15429097 | 15429134 | 24401 | 24438 | - | exon | coding_transcript | ||
| 15429097 | 15429134 | 24401 | 24438 | - | five_prime_utr | coding_transcript | ||
| 15426357 | 15428351 | 25184 | 27178 | - | gene | CG7333 | coding_transcript | |
| 15423224 | 15424671 | 28864 | 30311 | + | gene | Cpr92A | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
CG7342[20475]::S000169_fly_pretag_rev
AACTACAAGTCCAGTATAACCGAGTTCCACAATCCAAACATATTTACTCActtgtcgtcgtcatccttgtagtca
|
Fasta
|
|
CG7342[20475]::S000169_fly_pretag_fwd
CCCAAAACGCGAAAATGTACTCGCAGTCAACGGAATCGGCCGTCTACTTTgaagtgcataccaatcaggacccgc
|
Fasta
|