Clone: 2081450050271747 H02
Tagged gene: CG1572
Identifier: FBgn0030309
| Clone | FlyFos023534(pRedFlp-Hgr)(CG1572[40819]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-X | ||||||||
| 11474851 | 11479787 | 10684 | 15620 | - | gene | nod | coding_transcript | |
| 11475990 | 11478208 | 12263 | 14481 | + | gene | CG1561 | coding_transcript | |
| 11470916 | 11472839 | 17632 | 19555 | - | gene | CG11695 | coding_transcript | |
| 11470151 | 11470628 | 19843 | 20320 | + | gene | e(y)2 | coding_transcript | |
| 11467834 | 11470183 | 20288 | 22637 | - | gene | CG11696 | coding_transcript | |
| 11466740 | 11467673 | 22798 | 23731 | - | gene | CG11697 | coding_transcript | |
| 11465400 | 11466475 | 23996 | 25071 | + | gene | Kmn1 | coding_transcript | |
| 11464657 | 11465445 | 25026 | 25814 | - | gene | CG11699 | coding_transcript | |
| 11456806 | 11464355 | 26116 | 33665 | + | gene | RpII215 | coding_transcript | |
| 11455562 | 11456813 | 33658 | 34909 | - | gene | PGRP-SA | coding_transcript | |
| 11449318 | 11452687 | 37784 | 42215 | + | gene | CG1572 | coding_transcript | |
| 11449318 | 11452687 | 37784 | 42215 | + | mrna | FBtr0073543 | coding_transcript | |
| 11452572 | 11452687 | 37784 | 37899 | + | exon | coding_transcript | ||
| 11452572 | 11452687 | 37784 | 37899 | + | five_prime_utr | coding_transcript | ||
| 11449318 | 11452679 | 37792 | 42215 | + | mrna | FBtr0073544 | coding_transcript | |
| 11452566 | 11452679 | 37792 | 37905 | + | exon | coding_transcript | ||
| 11452566 | 11452679 | 37792 | 37905 | + | five_prime_utr | coding_transcript | ||
| 11450380 | 11452571 | 37900 | 40091 | + | intron | coding_transcript | ||
| 11450380 | 11452565 | 37906 | 40091 | + | intron | coding_transcript | ||
| 11450217 | 11450379 | 40092 | 40254 | + | exon | coding_transcript | ||
| 11450217 | 11450379 | 40092 | 40254 | + | exon | coding_transcript | ||
| 11450334 | 11450379 | 40092 | 40137 | + | five_prime_utr | coding_transcript | ||
| 11450334 | 11450379 | 40092 | 40137 | + | five_prime_utr | coding_transcript | ||
| 11450217 | 11450333 | 40138 | 40254 | + | cds | coding_transcript | ||
| 11450217 | 11450333 | 40138 | 40254 | + | cds | coding_transcript | ||
| 11450145 | 11450216 | 40255 | 40326 | + | intron | coding_transcript | ||
| 11450145 | 11450216 | 40255 | 40326 | + | intron | coding_transcript | ||
| 11449959 | 11450144 | 40327 | 40512 | + | exon | coding_transcript | ||
| 11449959 | 11450144 | 40327 | 40512 | + | cds | coding_transcript | ||
| 11449959 | 11450144 | 40327 | 40512 | + | exon | coding_transcript | ||
| 11449959 | 11450144 | 40327 | 40512 | + | cds | coding_transcript | ||
| 11449829 | 11449958 | 40513 | 40642 | + | intron | coding_transcript | ||
| 11449829 | 11449958 | 40513 | 40642 | + | intron | coding_transcript | ||
| 11449318 | 11449828 | 40643 | 42215 | + | exon | coding_transcript | ||
| 11449318 | 11449828 | 40643 | 42215 | + | exon | coding_transcript | ||
| 11449649 | 11449828 | 40643 | 41884 | + | cds | coding_transcript | ||
| 11449649 | 11449828 | 40643 | 41884 | + | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 1482 | 1541 | 40820 | 40879 | + | cds | 2xTY1 | CLC | |
| 1548 | 2264 | 40886 | 41602 | + | cds | SGFP | CLC | |
| 2271 | 2312 | 41609 | 41650 | + | cds | V5 | CLC | |
| 2313 | 2336 | 41651 | 41674 | + | cds | Precision cut site | CLC | |
| 2337 | 2357 | 41675 | 41695 | + | cds | TEV | CLC | |
| 2358 | 2429 | 41696 | 41767 | + | cds | BLRP | CLC | |
| 3813 | 3846 | 41775 | 41808 | + | misc_recomb | FRT | CLC | |
| dmel-5.43-X | ||||||||
| 11449318 | 11449648 | 41885 | 42215 | + | three_prime_utr | coding_transcript | ||
| 11449318 | 11449648 | 41885 | 42215 | + | three_prime_utr | coding_transcript | ||
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
CG1572[40819]::S000169_fly_pretag_rev
TCCACTTGAATGGCCGAGTGGGCGGTGGGTTTTGGGTGCTTTAGTGCTTActtgtcgtcgtcatccttgtagtca
|
Fasta
|
|
CG1572[40819]::S000169_fly_pretag_fwd
TGCTGTACTTCATCAGCGCCTTCCTGGCCCACCGATCCTATCGCGGCATTgaagtgcataccaatcaggacccgc
|
Fasta
|