Clone: 6185885656382698 D05
Tagged gene: CG8368
Identifier: FBgn0035707
| Clone | FlyFos023398(pRedFlp-Hgr)(CG8368[29817]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good |
Genes in pFlyFos vector
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3L | ||||||||
| 6587038 | 6596466 | 15340 | 24768 | - | gene | ndl | coding_transcript | |
| 6597237 | 6601860 | 25539 | 31224 | + | gene | CG8368 | coding_transcript | |
| 6597237 | 6601860 | 25539 | 31224 | + | mrna | FBtr0076976 | coding_transcript | |
| 6597237 | 6597284 | 25539 | 25586 | + | exon | coding_transcript | ||
| 6597237 | 6597284 | 25539 | 25586 | + | five_prime_utr | coding_transcript | ||
| 6597285 | 6599394 | 25587 | 27696 | + | intron | coding_transcript | ||
| 6597455 | 6599129 | 25757 | 27431 | - | gene | zpg | coding_transcript | |
| 6597455 | 6599129 | 25757 | 27431 | - | mrna | FBtr0076983 | coding_transcript | |
| 6597455 | 6598302 | 25757 | 26604 | - | exon | coding_transcript | ||
| 6597455 | 6597777 | 25757 | 26079 | - | three_prime_utr | coding_transcript | ||
| 6597778 | 6598302 | 26080 | 26604 | - | cds | coding_transcript | ||
| 6598303 | 6598374 | 26605 | 26676 | - | intron | coding_transcript | ||
| 6598375 | 6598676 | 26677 | 26978 | - | exon | coding_transcript | ||
| 6598375 | 6598676 | 26677 | 26978 | - | cds | coding_transcript | ||
| 6598677 | 6598732 | 26979 | 27034 | - | intron | coding_transcript | ||
| 6598733 | 6599129 | 27035 | 27431 | - | exon | coding_transcript | ||
| 6598733 | 6599009 | 27035 | 27311 | - | cds | coding_transcript | ||
| 6599010 | 6599129 | 27312 | 27431 | - | five_prime_utr | coding_transcript | ||
| 6599299 | 6601860 | 27601 | 31224 | + | mrna | FBtr0076977 | coding_transcript | |
| 6599299 | 6600178 | 27601 | 28480 | + | exon | coding_transcript | ||
| 6599299 | 6599416 | 27601 | 27718 | + | five_prime_utr | coding_transcript | ||
| 6599395 | 6600178 | 27697 | 28480 | + | exon | coding_transcript | ||
| 6599395 | 6599416 | 27697 | 27718 | + | five_prime_utr | coding_transcript | ||
| 6599417 | 6600178 | 27719 | 28480 | + | cds | coding_transcript | ||
| 6599417 | 6600178 | 27719 | 28480 | + | cds | coding_transcript | ||
| 6600179 | 6600234 | 28481 | 28536 | + | intron | coding_transcript | ||
| 6600179 | 6600234 | 28481 | 28536 | + | intron | coding_transcript | ||
| 6600235 | 6601860 | 28537 | 31224 | + | exon | coding_transcript | ||
| 6600235 | 6601860 | 28537 | 31224 | + | exon | coding_transcript | ||
| 6600235 | 6601518 | 28537 | 30882 | + | cds | coding_transcript | ||
| 6600235 | 6601518 | 28537 | 30882 | + | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 1482 | 1541 | 29818 | 29877 | + | cds | 2xTY1 | CLC | |
| 1548 | 2264 | 29884 | 30600 | + | cds | SGFP | CLC | |
| 2271 | 2312 | 30607 | 30648 | + | cds | V5 | CLC | |
| 2313 | 2336 | 30649 | 30672 | + | cds | Precision cut site | CLC | |
| 2337 | 2357 | 30673 | 30693 | + | cds | TEV | CLC | |
| 2358 | 2429 | 30694 | 30765 | + | cds | BLRP | CLC | |
| 3813 | 3846 | 30773 | 30806 | + | misc_recomb | FRT | CLC | |
| dmel-5.43-3L | ||||||||
| 6601519 | 6601860 | 30883 | 31224 | + | three_prime_utr | coding_transcript | ||
| 6601519 | 6601860 | 30883 | 31224 | + | three_prime_utr | coding_transcript | ||
| 6602425 | 6611280 | 31789 | 40644 | + | gene | CG8398 | coding_transcript | |
Sets
Oligos
| Name/Sequence | Export |
|---|---|
|
CG8368[29817]::S000169_fly_pretag_rev
GGGTATCCATGGAGGCGGTTAGCATAAGTAAGGTTCTTAAAAGCTCCCTActtgtcgtcgtcatccttgtagtca
|
Fasta
|
|
CG8368[29817]::S000169_fly_pretag_fwd
CCAAAATAGCCATCAAGCGACTAAACGGATCGAATCAGACTATGGAAAGTgaagtgcataccaatcaggacccgc
|
Fasta
|