Clone: 6185885656382698 E03

Tagged gene: Or2a
Identifier: FBgn0023523

Clone FlyFos023365(pRedFlp-Hgr)(Or2a[13700]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation

Type Status Download / View
Grows in selection good
NGS-based tag validation bad
Whole tag sequencing full download [show/hide details]

Genes in pFlyFos vector

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-X
2141627 2144015 11210 13598 + gene crn coding_transcript
2140264 2141609 13616 16023 - gene Or2a coding_transcript
2140264 2141609 13616 16023 - mrna FBtr0070397 coding_transcript
2141477 2141609 13616 14810 - exon coding_transcript
2141528 2141609 13616 13697 - three_prime_utr coding_transcript
2141477 2141527 13698 14810 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 13774 13807 - misc_recomb FRT CLC
2358 2429 13815 13886 - cds BLRP CLC
2337 2357 13887 13907 - cds TEV CLC
2313 2336 13908 13931 - cds Precision cut site CLC
2271 2312 13932 13973 - cds V5 CLC
1548 2264 13980 14696 - cds SGFP CLC
1482 1541 14703 14762 - cds 2xTY1 CLC
dmel-5.43-X
2141407 2141476 14811 14880 - intron coding_transcript
2140264 2141406 14881 16023 - exon coding_transcript
2140264 2141406 14881 16023 - cds coding_transcript
2136137 2140079 16208 20150 - gene fs(1)K10 coding_transcript
2131956 2136071 20216 24331 + gene kz coding_transcript
2119744 2132089 24198 36543 - gene pcx coding_transcript
2117884 2118698 37589 38403 - gene CG14052 coding_transcript
2108319 2116492 39795 47968 + gene Vinc coding_transcript

Sets

Oligos

Name/Sequence Export
Or2a[13700]::S000169_fly_pretag_rev
CTATTGTGCTTTAAAATTTTTCTCCCCAAAAAGAGATTATAAAGTTCTTActtgtcgtcgtcatccttgtagtca
 fasta Fasta
Or2a[13700]::S000169_fly_pretag_fwd
AGGTCATGAGGTTCACATACTCTGTTTTCACACTCTTGCTGAGGGCCAAGgaagtgcataccaatcaggacccgc
 fasta Fasta