Clone: 6185885656382698 B03
Tagged gene: Cp190
Identifier: FBgn0000283
| Clone | FlyFos023363(pRedFlp-Hgr)(Cp190[16431]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | bad |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3R | ||||||||
| 11091298 | 11092412 | 10962 | 12076 | + | gene | Oscp | coding_transcript | |
| 11092406 | 11094260 | 12070 | 13924 | - | gene | CG14864 | coding_transcript | |
| 11094405 | 11096254 | 14069 | 15918 | + | gene | CG4334 | coding_transcript | |
| 11096146 | 11100927 | 15810 | 21653 | - | gene | Cp190 | coding_transcript | |
| 11096146 | 11100927 | 15810 | 21653 | - | mrna | FBtr0083126 | coding_transcript | |
| 11096146 | 11100512 | 15810 | 21238 | - | mrna | FBtr0083127 | coding_transcript | |
| 11096146 | 11097712 | 15810 | 18438 | - | exon | coding_transcript | ||
| 11096146 | 11097712 | 15810 | 18438 | - | exon | coding_transcript | ||
| 11096146 | 11096764 | 15810 | 16428 | - | three_prime_utr | coding_transcript | ||
| 11096146 | 11096764 | 15810 | 16428 | - | three_prime_utr | coding_transcript | ||
| 11096765 | 11097712 | 16429 | 18438 | - | cds | coding_transcript | ||
| 11096765 | 11097712 | 16429 | 18438 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 16505 | 16538 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 16546 | 16617 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 16618 | 16638 | - | cds | TEV | CLC | |
| 2313 | 2336 | 16639 | 16662 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 16663 | 16704 | - | cds | V5 | CLC | |
| 1548 | 2264 | 16711 | 17427 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 17434 | 17493 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-3R | ||||||||
| 11097713 | 11097772 | 18439 | 18498 | - | intron | coding_transcript | ||
| 11097713 | 11097772 | 18439 | 18498 | - | intron | coding_transcript | ||
| 11097773 | 11098713 | 18499 | 19439 | - | exon | coding_transcript | ||
| 11097773 | 11098713 | 18499 | 19439 | - | cds | coding_transcript | ||
| 11097773 | 11098713 | 18499 | 19439 | - | exon | coding_transcript | ||
| 11097773 | 11098713 | 18499 | 19439 | - | cds | coding_transcript | ||
| 11098714 | 11098778 | 19440 | 19504 | - | intron | coding_transcript | ||
| 11098714 | 11098778 | 19440 | 19504 | - | intron | coding_transcript | ||
| 11098779 | 11099778 | 19505 | 20504 | - | exon | coding_transcript | ||
| 11098779 | 11099778 | 19505 | 20504 | - | cds | coding_transcript | ||
| 11098779 | 11099778 | 19505 | 20504 | - | exon | coding_transcript | ||
| 11098779 | 11099778 | 19505 | 20504 | - | cds | coding_transcript | ||
| 11099779 | 11099836 | 20505 | 20562 | - | intron | coding_transcript | ||
| 11099779 | 11099836 | 20505 | 20562 | - | intron | coding_transcript | ||
| 11099837 | 11100512 | 20563 | 21238 | - | exon | coding_transcript | ||
| 11099837 | 11100333 | 20563 | 21059 | - | exon | coding_transcript | ||
| 11099837 | 11100238 | 20563 | 20964 | - | cds | coding_transcript | ||
| 11099837 | 11100238 | 20563 | 20964 | - | cds | coding_transcript | ||
| 11100239 | 11100512 | 20965 | 21238 | - | five_prime_utr | coding_transcript | ||
| 11100239 | 11100333 | 20965 | 21059 | - | five_prime_utr | coding_transcript | ||
| 11100334 | 11100846 | 21060 | 21572 | - | intron | coding_transcript | ||
| 11100847 | 11100927 | 21573 | 21653 | - | exon | coding_transcript | ||
| 11100847 | 11100927 | 21573 | 21653 | - | five_prime_utr | coding_transcript | ||
| 11101258 | 11102196 | 21984 | 22922 | + | gene | CG4338 | coding_transcript | |
| 11102162 | 11103831 | 22888 | 24557 | - | gene | MRG15 | coding_transcript | |
| 11103870 | 11104351 | 24596 | 25077 | - | gene | l(3)neo43 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
Cp190[16431]::S000169_fly_pretag_fwd
ATGAGGACGAGGATGAGAATGGGGTTAGTGCGGCGGCGAAGGAGGAGCTAgaagtgcataccaatcaggacccgc
|
Fasta
|
|
Cp190[16431]::S000169_fly_pretag_rev
TGACCTGCGTTGAATCGCCAAACTTAGAACATAAATAAATCTAGTAATTActtgtcgtcgtcatccttgtagtca
|
Fasta
|