Clone: 06687462840789027 G07

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Export Fasta GenBank GFF

Validation(click to hide details)

Type	Status	Download / View
Grows in selection	good
NGS-based tag validation	bad

Genes in pFlyFos vector(click to hide details)

Gene		Clone relative			Genome relative
Name	Length	Start	End	Strand	Start	End	Strand
DsRed	716	8417	9132	+	8417	9132	+

Features(click to show details)

Start (Source)	End (Source)	Start	End	Strand	Type	Name	Source
pFlyFos
1	107	1	107	-	cds	LacZ	epicentre
4	21	4	21	-	primer_bind	CC2_rev	epicentre
310	593	310	593	+	misc_recomb	attB	epicentre
727	1386	727	1386	-	cds	Cat	epicentre
1605	1952	1605	1952	+	cds	redF	epicentre
2336	2953	2336	2953	+	rep_origin	oriV	epicentre
2953	3007	2953	3007	+	rep_origin	ori2	epicentre
3347	4102	3347	4102	+	cds	repE	epicentre
4681	5856	4681	5856	+	cds	parA	epicentre
5856	6827	5856	6827	+	cds	parB	epicentre
6900	7417	6900	7417	+	repeat_region	parC	epicentre
7633	8031	7633	8031	+	misc_binding	cos	epicentre
8049	8082	8049	8082	+	misc_recomb	loxP	epicentre
8182	8416	8182	8416	+	promoter	3xP3	epicentre
8417	9132	8417	9132	+	gene	DsRed	epicentre
8452	9132	8452	9132	+	cds	DsRed	epicentre
9284	9334	9284	9334	+	terminator	SV40	epicentre
9408	9630	9408	9630	-	cds	LacZ	epicentre
9559	9576	9559	9576	+	primer_bind	T7	epicentre
9610	9627	9610	9627	+	primer_bind	CC2_fwd	epicentre
dmel-5.43-2R
7274663	7276282	16380	17999	+	gene	CG30022	coding_transcript
7267849	7271613	21049	24813	+	gene	CG9027	coding_transcript
7264967	7266682	25980	27695	+	gene	Tsp47F	coding_transcript
7261112	7264614	28048	32612	-	gene	CG13203	coding_transcript
7261112	7264614	28048	32612	-	mrna	FBtr0304901	coding_transcript
7262688	7264614	28048	31036	-	mrna	FBtr0304902	coding_transcript
7263734	7264614	28048	29990	-	exon		coding_transcript
7263734	7264614	28048	29990	-	exon		coding_transcript
7264327	7264614	28048	28335	-	three_prime_utr		coding_transcript
7264327	7264614	28048	28335	-	three_prime_utr		coding_transcript
7263734	7264326	28336	29990	-	cds		coding_transcript
7263734	7264326	28336	29990	-	cds		coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437	2470	28412	28445	-	misc_recomb	FRT	CLC
2358	2429	28453	28524	-	cds	BLRP	CLC
2337	2357	28525	28545	-	cds	TEV	CLC
2313	2336	28546	28569	-	cds	Precision cut site	CLC
2271	2312	28570	28611	-	cds	V5	CLC
1548	2264	28618	29334	-	cds	SGFP	CLC
1482	1541	29341	29400	-	cds	2xTY1	CLC
dmel-5.43-2R
7263424	7263733	29991	30300	-	intron		coding_transcript
7263424	7263733	29991	30300	-	intron		coding_transcript
7262688	7263423	30301	31036	-	exon		coding_transcript
7262813	7263423	30301	30911	-	exon		coding_transcript
7262813	7263423	30301	30911	-	cds		coding_transcript
7263039	7263423	30301	30685	-	cds		coding_transcript
7262688	7263038	30686	31036	-	five_prime_utr		coding_transcript
7261906	7262812	30912	31818	-	intron		coding_transcript
7261112	7261905	31819	32612	-	exon		coding_transcript
7261484	7261905	31819	32240	-	cds		coding_transcript
7261112	7261483	32241	32612	-	five_prime_utr		coding_transcript
7257805	7258675	35049	35919	+	gene	Tapdelta	coding_transcript
7254216	7257789	35935	39508	-	gene	CG13204	coding_transcript
7249405	7250774	42950	44319	-	gene	Gr47b	coding_transcript
7248213	7249376	44348	45511	-	gene	san	coding_transcript
7246942	7247668	46056	46782	+	gene	ix	coding_transcript
7245407	7246674	47050	48317	+	gene	CG12384	coding_transcript
7244227	7245041	48683	49497	-	gene	iotaTry	coding_transcript
7243619	7243998	49726	50105	+	gene	CG13202	coding_transcript
7242838	7243633	50091	50886	-	gene	deltaTry	coding_transcript
7241103	7241864	51860	52621	+	gene	CG30025	coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence	Export
CG13203[28338]::S000169_fly_pretag_fwd CTCCAGTCACGGCCATCGAACGCCTCTCGGAAGCTCTGCTCCAGAGCAAGgaagtgcataccaatcaggacccgc	Fasta
CG13203[28338]::S000169_fly_pretag_rev GGTCGGATTCCATGGAACTGGAACTTGGTTTCCCATCCGTCAGTTCCCTActtgtcgtcgtcatccttgtagtca	Fasta