Clone: 06687462840789027 G04
Tagged gene: His4:CG33891
Identifier: FBgn0053891
Clone | FlyFos023287(pRedFlp-Hgr)(His4:CG33891[33335]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
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Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | bad |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
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pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2L | ||||||||
21501758 | 21502655 | 9770 | 10667 | - | gene | His1:CG33843 | coding_transcript | |
21499920 | 21500387 | 12038 | 12505 | - | gene | His3:CG33842 | coding_transcript | |
21499369 | 21499894 | 12531 | 13056 | + | gene | His4:CG33883 | coding_transcript | |
21498485 | 21499053 | 13372 | 13940 | - | gene | His2A:CG33841 | coding_transcript | |
21497922 | 21498476 | 13949 | 14503 | + | gene | His2B:CG33884 | coding_transcript | |
21496711 | 21497608 | 14817 | 15714 | - | gene | His1:CG33840 | coding_transcript | |
21494875 | 21495342 | 17083 | 17550 | - | gene | His3:CG33839 | coding_transcript | |
21494324 | 21494849 | 17576 | 18101 | + | gene | His4:CG33885 | coding_transcript | |
21493440 | 21494008 | 18417 | 18985 | - | gene | His2A:CG33838 | coding_transcript | |
21492877 | 21493431 | 18994 | 19548 | + | gene | His2B:CG33886 | coding_transcript | |
21491666 | 21492563 | 19862 | 20759 | - | gene | His1:CG33837 | coding_transcript | |
21489830 | 21490297 | 22128 | 22595 | - | gene | His3:CG33836 | coding_transcript | |
21489279 | 21489804 | 22621 | 23146 | + | gene | His4:CG33887 | coding_transcript | |
21488395 | 21488963 | 23462 | 24030 | - | gene | His2A:CG33835 | coding_transcript | |
21487832 | 21488386 | 24039 | 24593 | + | gene | His2B:CG33888 | coding_transcript | |
21486621 | 21487518 | 24907 | 25804 | - | gene | His1:CG33834 | coding_transcript | |
21484681 | 21485148 | 27277 | 27744 | - | gene | His3:CG33833 | coding_transcript | |
21484130 | 21484655 | 27770 | 28295 | + | gene | His4:CG33889 | coding_transcript | |
21483244 | 21483812 | 28613 | 29181 | - | gene | His2A:CG33832 | coding_transcript | |
21482681 | 21483235 | 29190 | 29744 | + | gene | His2B:CG33890 | coding_transcript | |
21481470 | 21482367 | 30058 | 30955 | - | gene | His1:CG33831 | coding_transcript | |
21479636 | 21480103 | 32322 | 32789 | - | gene | His3:CG33830 | coding_transcript | |
21479087 | 21479610 | 32815 | 34400 | + | gene | His4:CG33891 | coding_transcript | |
21479087 | 21479610 | 32815 | 34400 | + | mrna | FBtr0091895 | coding_transcript | |
21479087 | 21479610 | 32815 | 34400 | + | exon | coding_transcript | ||
21479399 | 21479610 | 32815 | 33026 | + | five_prime_utr | coding_transcript | ||
21479087 | 21479398 | 33027 | 34400 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 33336 | 33395 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 33402 | 34118 | + | cds | SGFP | CLC | |
2271 | 2312 | 34125 | 34166 | + | cds | V5 | CLC | |
2313 | 2336 | 34167 | 34190 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 34191 | 34211 | + | cds | TEV | CLC | |
2358 | 2429 | 34212 | 34283 | + | cds | BLRP | CLC | |
3813 | 3846 | 34291 | 34324 | + | misc_recomb | FRT | CLC | |
dmel-5.43-2L | ||||||||
21478201 | 21478769 | 34718 | 35286 | - | gene | His2A:CG33829 | coding_transcript | |
21477638 | 21478192 | 35295 | 35849 | + | gene | His2B:CG33892 | coding_transcript | |
21476427 | 21477324 | 36163 | 37060 | - | gene | His1:CG33828 | coding_transcript | |
21474593 | 21475060 | 38427 | 38894 | - | gene | His3:CG33827 | coding_transcript | |
21474044 | 21474567 | 38920 | 39443 | + | gene | His4:CG33893 | coding_transcript | |
21473158 | 21473726 | 39761 | 40329 | - | gene | His2A:CG33826 | coding_transcript | |
21472595 | 21473149 | 40338 | 40892 | + | gene | His2B:CG33894 | coding_transcript | |
21471384 | 21472281 | 41206 | 42103 | - | gene | His1:CG33825 | coding_transcript | |
21469550 | 21470017 | 43470 | 43937 | - | gene | His3:CG33824 | coding_transcript | |
21469001 | 21469524 | 43963 | 44486 | + | gene | His4:CG33895 | coding_transcript | |
21468115 | 21468683 | 44804 | 45372 | - | gene | His2A:CG33823 | coding_transcript | |
21467552 | 21468106 | 45381 | 45935 | + | gene | His2B:CG33896 | coding_transcript | |
21466341 | 21467238 | 46249 | 47146 | - | gene | His1:CG33822 | coding_transcript | |
21464507 | 21464974 | 48513 | 48980 | - | gene | His3:CG33821 | coding_transcript | |
21463958 | 21464481 | 49006 | 49529 | + | gene | His4:CG33897 | coding_transcript | |
21463072 | 21463640 | 49847 | 50415 | - | gene | His2A:CG33820 | coding_transcript | |
21462509 | 21463063 | 50424 | 50978 | + | gene | His2B:CG33898 | coding_transcript | |
21461298 | 21462195 | 51292 | 52189 | - | gene | His1:CG33819 | coding_transcript | |
21459447 | 21459914 | 53573 | 54040 | - | gene | His3:CG33818 | coding_transcript | |
21458898 | 21459421 | 54066 | 54589 | + | gene | His4:CG33899 | coding_transcript | |
21458012 | 21458580 | 54907 | 55475 | - | gene | His2A:CG33817 | coding_transcript | |
21457449 | 21458003 | 55484 | 56038 | + | gene | His2B:CG33900 | coding_transcript | |
21456238 | 21457135 | 56352 | 57249 | - | gene | His1:CG33816 | coding_transcript | |
21454388 | 21454855 | 58632 | 59099 | - | gene | His3:CG33815 | coding_transcript | |
21453835 | 21454362 | 59125 | 59652 | + | gene | His4:CG33901 | coding_transcript | |
21452951 | 21453519 | 59968 | 60536 | - | gene | His2A:CG33814 | coding_transcript | |
21452388 | 21452942 | 60545 | 61099 | + | gene | His2B:CG33902 | coding_transcript | |
21451177 | 21452074 | 61413 | 62310 | - | gene | His1:CG33813 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
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His4:CG33891[33335]::S000169_fly_pretag_fwd
TTGTGTACGCTCTGAAGAGGCAAGGCCGCACCCTCTACGGATTTGGCGGTgaagtgcataccaatcaggacccgc
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His4:CG33891[33335]::S000169_fly_pretag_rev
CTGAAAAGGACCGATTGCTTAATAGGGGTACACAGGATGTACACTTTTTActtgtcgtcgtcatccttgtagtca
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