Clone: 2086307455001194 A11
Tagged gene: lt
Identifier: FBgn0002566
| Clone | FlyFos023234(pRedFlp-Hgr)(lt[35855]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-2L | ||||||||
| 22817519 | 22833492 | 20199 | 37234 | + | gene | lt | coding_transcript | |
| 22817519 | 22833492 | 20199 | 37234 | + | mrna | FBtr0111123 | coding_transcript | |
| 22817519 | 22833492 | 20199 | 37234 | + | mrna | FBtr0111124 | coding_transcript | |
| 22817519 | 22833492 | 20199 | 37234 | + | mrna | FBtr0111125 | coding_transcript | |
| 22817519 | 22817657 | 20199 | 20337 | + | exon | coding_transcript | ||
| 22817519 | 22817657 | 20199 | 20337 | + | five_prime_utr | coding_transcript | ||
| 22817519 | 22817657 | 20199 | 20337 | + | exon | coding_transcript | ||
| 22817519 | 22817652 | 20199 | 20332 | + | exon | coding_transcript | ||
| 22817519 | 22817652 | 20199 | 20332 | + | five_prime_utr | coding_transcript | ||
| 22817519 | 22817627 | 20199 | 20307 | + | five_prime_utr | coding_transcript | ||
| 22817628 | 22817657 | 20308 | 20337 | + | cds | coding_transcript | ||
| 22817653 | 22817713 | 20333 | 20393 | + | intron | coding_transcript | ||
| 22817658 | 22817713 | 20338 | 20393 | + | intron | coding_transcript | ||
| 22817658 | 22817713 | 20338 | 20393 | + | intron | coding_transcript | ||
| 22817714 | 22818062 | 20394 | 20742 | + | exon | coding_transcript | ||
| 22817714 | 22818062 | 20394 | 20742 | + | five_prime_utr | coding_transcript | ||
| 22817714 | 22817839 | 20394 | 20519 | + | exon | coding_transcript | ||
| 22817714 | 22817839 | 20394 | 20519 | + | exon | coding_transcript | ||
| 22817714 | 22817839 | 20394 | 20519 | + | cds | coding_transcript | ||
| 22817714 | 22817794 | 20394 | 20474 | + | five_prime_utr | coding_transcript | ||
| 22817795 | 22817839 | 20475 | 20519 | + | cds | coding_transcript | ||
| 22817840 | 22817891 | 20520 | 20571 | + | intron | coding_transcript | ||
| 22817840 | 22817891 | 20520 | 20571 | + | intron | coding_transcript | ||
| 22817892 | 22818062 | 20572 | 20742 | + | exon | coding_transcript | ||
| 22817892 | 22818062 | 20572 | 20742 | + | cds | coding_transcript | ||
| 22817892 | 22818062 | 20572 | 20742 | + | exon | coding_transcript | ||
| 22817892 | 22818062 | 20572 | 20742 | + | cds | coding_transcript | ||
| 22818063 | 22818112 | 20743 | 20792 | + | intron | coding_transcript | ||
| 22818063 | 22818112 | 20743 | 20792 | + | intron | coding_transcript | ||
| 22818063 | 22818112 | 20743 | 20792 | + | intron | coding_transcript | ||
| 22818113 | 22818230 | 20793 | 20910 | + | exon | coding_transcript | ||
| 22818113 | 22818230 | 20793 | 20910 | + | five_prime_utr | coding_transcript | ||
| 22818113 | 22818230 | 20793 | 20910 | + | exon | coding_transcript | ||
| 22818113 | 22818230 | 20793 | 20910 | + | cds | coding_transcript | ||
| 22818113 | 22818230 | 20793 | 20910 | + | exon | coding_transcript | ||
| 22818113 | 22818230 | 20793 | 20910 | + | cds | coding_transcript | ||
| 22818231 | 22818297 | 20911 | 20977 | + | intron | coding_transcript | ||
| 22818231 | 22818297 | 20911 | 20977 | + | intron | coding_transcript | ||
| 22818231 | 22818297 | 20911 | 20977 | + | intron | coding_transcript | ||
| 22818298 | 22818651 | 20978 | 21331 | + | exon | coding_transcript | ||
| 22818298 | 22818651 | 20978 | 21331 | + | five_prime_utr | coding_transcript | ||
| 22818298 | 22818651 | 20978 | 21331 | + | exon | coding_transcript | ||
| 22818298 | 22818651 | 20978 | 21331 | + | cds | coding_transcript | ||
| 22818298 | 22818651 | 20978 | 21331 | + | exon | coding_transcript | ||
| 22818298 | 22818651 | 20978 | 21331 | + | cds | coding_transcript | ||
| 22818652 | 22820169 | 21332 | 22849 | + | intron | coding_transcript | ||
| 22818652 | 22820169 | 21332 | 22849 | + | intron | coding_transcript | ||
| 22818652 | 22820169 | 21332 | 22849 | + | intron | coding_transcript | ||
| 22820170 | 22820497 | 22850 | 23177 | + | exon | coding_transcript | ||
| 22820170 | 22820497 | 22850 | 23177 | + | exon | coding_transcript | ||
| 22820170 | 22820497 | 22850 | 23177 | + | cds | coding_transcript | ||
| 22820170 | 22820497 | 22850 | 23177 | + | exon | coding_transcript | ||
| 22820170 | 22820497 | 22850 | 23177 | + | cds | coding_transcript | ||
| 22820170 | 22820309 | 22850 | 22989 | + | five_prime_utr | coding_transcript | ||
| 22820310 | 22820497 | 22990 | 23177 | + | cds | coding_transcript | ||
| 22820498 | 22831505 | 23178 | 34185 | + | intron | coding_transcript | ||
| 22820498 | 22831505 | 23178 | 34185 | + | intron | coding_transcript | ||
| 22820498 | 22831505 | 23178 | 34185 | + | intron | coding_transcript | ||
| 22831506 | 22831574 | 34186 | 34254 | + | exon | coding_transcript | ||
| 22831506 | 22831574 | 34186 | 34254 | + | cds | coding_transcript | ||
| 22831506 | 22831574 | 34186 | 34254 | + | exon | coding_transcript | ||
| 22831506 | 22831574 | 34186 | 34254 | + | cds | coding_transcript | ||
| 22831506 | 22831574 | 34186 | 34254 | + | exon | coding_transcript | ||
| 22831506 | 22831574 | 34186 | 34254 | + | cds | coding_transcript | ||
| 22831575 | 22831635 | 34255 | 34315 | + | intron | coding_transcript | ||
| 22831575 | 22831635 | 34255 | 34315 | + | intron | coding_transcript | ||
| 22831575 | 22831635 | 34255 | 34315 | + | intron | coding_transcript | ||
| 22831636 | 22832037 | 34316 | 34717 | + | exon | coding_transcript | ||
| 22831636 | 22832037 | 34316 | 34717 | + | cds | coding_transcript | ||
| 22831636 | 22832037 | 34316 | 34717 | + | exon | coding_transcript | ||
| 22831636 | 22832037 | 34316 | 34717 | + | cds | coding_transcript | ||
| 22831636 | 22832037 | 34316 | 34717 | + | exon | coding_transcript | ||
| 22831636 | 22832037 | 34316 | 34717 | + | cds | coding_transcript | ||
| 22832038 | 22832085 | 34718 | 34765 | + | intron | coding_transcript | ||
| 22832038 | 22832085 | 34718 | 34765 | + | intron | coding_transcript | ||
| 22832038 | 22832085 | 34718 | 34765 | + | intron | coding_transcript | ||
| 22832086 | 22832272 | 34766 | 34952 | + | exon | coding_transcript | ||
| 22832086 | 22832272 | 34766 | 34952 | + | cds | coding_transcript | ||
| 22832086 | 22832272 | 34766 | 34952 | + | exon | coding_transcript | ||
| 22832086 | 22832272 | 34766 | 34952 | + | cds | coding_transcript | ||
| 22832086 | 22832272 | 34766 | 34952 | + | exon | coding_transcript | ||
| 22832086 | 22832272 | 34766 | 34952 | + | cds | coding_transcript | ||
| 22832273 | 22832326 | 34953 | 35006 | + | intron | coding_transcript | ||
| 22832273 | 22832326 | 34953 | 35006 | + | intron | coding_transcript | ||
| 22832273 | 22832326 | 34953 | 35006 | + | intron | coding_transcript | ||
| 22832327 | 22832566 | 35007 | 35246 | + | exon | coding_transcript | ||
| 22832327 | 22832566 | 35007 | 35246 | + | cds | coding_transcript | ||
| 22832327 | 22832566 | 35007 | 35246 | + | exon | coding_transcript | ||
| 22832327 | 22832566 | 35007 | 35246 | + | cds | coding_transcript | ||
| 22832327 | 22832566 | 35007 | 35246 | + | exon | coding_transcript | ||
| 22832327 | 22832566 | 35007 | 35246 | + | cds | coding_transcript | ||
| 22832567 | 22832618 | 35247 | 35298 | + | intron | coding_transcript | ||
| 22832567 | 22832618 | 35247 | 35298 | + | intron | coding_transcript | ||
| 22832567 | 22832618 | 35247 | 35298 | + | intron | coding_transcript | ||
| 22832619 | 22832745 | 35299 | 35425 | + | exon | coding_transcript | ||
| 22832619 | 22832745 | 35299 | 35425 | + | cds | coding_transcript | ||
| 22832619 | 22832745 | 35299 | 35425 | + | exon | coding_transcript | ||
| 22832619 | 22832745 | 35299 | 35425 | + | cds | coding_transcript | ||
| 22832619 | 22832745 | 35299 | 35425 | + | exon | coding_transcript | ||
| 22832619 | 22832745 | 35299 | 35425 | + | cds | coding_transcript | ||
| 22832746 | 22832804 | 35426 | 35484 | + | intron | coding_transcript | ||
| 22832746 | 22832804 | 35426 | 35484 | + | intron | coding_transcript | ||
| 22832746 | 22832804 | 35426 | 35484 | + | intron | coding_transcript | ||
| 22832805 | 22833492 | 35485 | 37234 | + | exon | coding_transcript | ||
| 22832805 | 22833492 | 35485 | 37234 | + | exon | coding_transcript | ||
| 22832805 | 22833492 | 35485 | 37234 | + | exon | coding_transcript | ||
| 22832805 | 22833178 | 35485 | 36920 | + | cds | coding_transcript | ||
| 22832805 | 22833178 | 35485 | 36920 | + | cds | coding_transcript | ||
| 22832805 | 22833178 | 35485 | 36920 | + | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 1482 | 1541 | 35856 | 35915 | + | cds | 2xTY1 | CLC | |
| 1548 | 2264 | 35922 | 36638 | + | cds | SGFP | CLC | |
| 2271 | 2312 | 36645 | 36686 | + | cds | V5 | CLC | |
| 2313 | 2336 | 36687 | 36710 | + | cds | Precision cut site | CLC | |
| 2337 | 2357 | 36711 | 36731 | + | cds | TEV | CLC | |
| 2358 | 2429 | 36732 | 36803 | + | cds | BLRP | CLC | |
| 3813 | 3846 | 36811 | 36844 | + | misc_recomb | FRT | CLC | |
| dmel-5.43-2L | ||||||||
| 22833179 | 22833492 | 36921 | 37234 | + | three_prime_utr | coding_transcript | ||
| 22833179 | 22833492 | 36921 | 37234 | + | three_prime_utr | coding_transcript | ||
| 22833179 | 22833492 | 36921 | 37234 | + | three_prime_utr | coding_transcript | ||
| 22841770 | 22843208 | 45512 | 46950 | - | gene | CG40005 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
lt[35855]::S000169_fly_pretag_fwd
TGCTTAAAAATTGCAACGAGTGTAACCTTTGGAAGTTAACCGTGGGGAAAgaagtgcataccaatcaggacccgc
|
Fasta
|
|
lt[35855]::S000169_fly_pretag_rev
TTCCCCTAACAGGACGCCGGGGTAACAGTTATGATGTCGCTATAAACCTActtgtcgtcgtcatccttgtagtca
|
Fasta
|