Clone: 2086307455001194 C07
Tagged gene: CG13992
Identifier: FBgn0031756
| Clone | FlyFos023176(pRedFlp-Hgr)(CG13992[26216]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-2L | ||||||||
| 5949484 | 5955238 | 10179 | 15933 | + | gene | CG9044 | coding_transcript | |
| 5955312 | 5956466 | 16007 | 17161 | - | gene | CG13999 | coding_transcript | |
| 5956512 | 5956805 | 17207 | 17500 | - | gene | CG13998 | coding_transcript | |
| 5957004 | 5957628 | 17699 | 18323 | + | gene | Vm26Ab | coding_transcript | |
| 5958005 | 5958631 | 18700 | 19326 | - | gene | Vm26Ac | coding_transcript | |
| 5959700 | 5960340 | 20395 | 21035 | - | gene | Vm26Aa | coding_transcript | |
| 5963087 | 5964322 | 23782 | 25017 | - | gene | psd | coding_transcript | |
| 5965391 | 5967752 | 26086 | 29509 | - | gene | CG13992 | coding_transcript | |
| 5965391 | 5967752 | 26086 | 29509 | - | mrna | FBtr0079237 | coding_transcript | |
| 5965391 | 5967752 | 26086 | 29509 | - | mrna | FBtr0303267 | coding_transcript | |
| 5965391 | 5967752 | 26086 | 29509 | - | mrna | FBtr0309288 | coding_transcript | |
| 5965391 | 5967565 | 26086 | 29322 | - | exon | coding_transcript | ||
| 5965391 | 5967562 | 26086 | 29319 | - | exon | coding_transcript | ||
| 5965391 | 5967562 | 26086 | 29319 | - | exon | coding_transcript | ||
| 5965391 | 5965518 | 26086 | 26213 | - | three_prime_utr | coding_transcript | ||
| 5965391 | 5965518 | 26086 | 26213 | - | three_prime_utr | coding_transcript | ||
| 5965391 | 5965518 | 26086 | 26213 | - | three_prime_utr | coding_transcript | ||
| 5965519 | 5967498 | 26214 | 29255 | - | cds | coding_transcript | ||
| 5965519 | 5967498 | 26214 | 29255 | - | cds | coding_transcript | ||
| 5965519 | 5967498 | 26214 | 29255 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 26290 | 26323 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 26331 | 26402 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 26403 | 26423 | - | cds | TEV | CLC | |
| 2313 | 2336 | 26424 | 26447 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 26448 | 26489 | - | cds | V5 | CLC | |
| 1548 | 2264 | 26496 | 27212 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 27219 | 27278 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-2L | ||||||||
| 5967499 | 5967565 | 29256 | 29322 | - | five_prime_utr | coding_transcript | ||
| 5967499 | 5967562 | 29256 | 29319 | - | five_prime_utr | coding_transcript | ||
| 5967499 | 5967562 | 29256 | 29319 | - | five_prime_utr | coding_transcript | ||
| 5967563 | 5967619 | 29320 | 29376 | - | intron | coding_transcript | ||
| 5967563 | 5967614 | 29320 | 29371 | - | intron | coding_transcript | ||
| 5967566 | 5967614 | 29323 | 29371 | - | intron | coding_transcript | ||
| 5967615 | 5967752 | 29372 | 29509 | - | exon | coding_transcript | ||
| 5967615 | 5967752 | 29372 | 29509 | - | five_prime_utr | coding_transcript | ||
| 5967615 | 5967752 | 29372 | 29509 | - | exon | coding_transcript | ||
| 5967615 | 5967752 | 29372 | 29509 | - | five_prime_utr | coding_transcript | ||
| 5967620 | 5967752 | 29377 | 29509 | - | exon | coding_transcript | ||
| 5967620 | 5967752 | 29377 | 29509 | - | five_prime_utr | coding_transcript | ||
| 5968566 | 5969761 | 30323 | 31518 | + | gene | Ucp4C | coding_transcript | |
| 5969871 | 5971025 | 31628 | 32782 | + | gene | Ucp4B | coding_transcript | |
| 5972115 | 5981025 | 33872 | 42782 | - | gene | chic | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
CG13992[26216]::S000169_fly_pretag_rev
AAATAAAACTTTATTCAATTTGAGGGATCCATTAACATATCTTCGAGCTActtgtcgtcgtcatccttgtagtca
|
Fasta
|
|
CG13992[26216]::S000169_fly_pretag_fwd
AGCGCTCCAGCGGACGTAGTCCCCAAAAGCATAGATACCTGCAGCAGTTGgaagtgcataccaatcaggacccgc
|
Fasta
|