Clone: 2086307455001194 C02
Tagged gene: CG7028
Identifier: FBgn0027587
| Clone | FlyFos023140(pRedFlp-Hgr)(CG7028[13887]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3L | ||||||||
| 206134 | 207527 | 11905 | 13298 | + | gene | CG13876 | coding_transcript | |
| 207887 | 211462 | 13658 | 18295 | - | gene | CG7028 | coding_transcript | |
| 207887 | 211462 | 13658 | 18295 | - | mrna | FBtr0072528 | coding_transcript | |
| 207887 | 208317 | 13658 | 15150 | - | exon | coding_transcript | ||
| 207887 | 208113 | 13658 | 13884 | - | three_prime_utr | coding_transcript | ||
| 208114 | 208317 | 13885 | 15150 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 13961 | 13994 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 14002 | 14073 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 14074 | 14094 | - | cds | TEV | CLC | |
| 2313 | 2336 | 14095 | 14118 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 14119 | 14160 | - | cds | V5 | CLC | |
| 1548 | 2264 | 14167 | 14883 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 14890 | 14949 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-3L | ||||||||
| 208318 | 208371 | 15151 | 15204 | - | intron | coding_transcript | ||
| 208372 | 208908 | 15205 | 15741 | - | exon | coding_transcript | ||
| 208372 | 208908 | 15205 | 15741 | - | cds | coding_transcript | ||
| 208909 | 208970 | 15742 | 15803 | - | intron | coding_transcript | ||
| 208971 | 209079 | 15804 | 15912 | - | exon | coding_transcript | ||
| 208971 | 209079 | 15804 | 15912 | - | cds | coding_transcript | ||
| 209080 | 209141 | 15913 | 15974 | - | intron | coding_transcript | ||
| 209142 | 209374 | 15975 | 16207 | - | exon | coding_transcript | ||
| 209142 | 209374 | 15975 | 16207 | - | cds | coding_transcript | ||
| 209375 | 209449 | 16208 | 16282 | - | intron | coding_transcript | ||
| 209450 | 209713 | 16283 | 16546 | - | exon | coding_transcript | ||
| 209450 | 209713 | 16283 | 16546 | - | cds | coding_transcript | ||
| 209714 | 209783 | 16547 | 16616 | - | intron | coding_transcript | ||
| 209784 | 210738 | 16617 | 17571 | - | exon | coding_transcript | ||
| 209784 | 210738 | 16617 | 17571 | - | cds | coding_transcript | ||
| 210739 | 210814 | 17572 | 17647 | - | intron | coding_transcript | ||
| 210815 | 211219 | 17648 | 18052 | - | exon | coding_transcript | ||
| 210815 | 211219 | 17648 | 18052 | - | cds | coding_transcript | ||
| 211220 | 211291 | 18053 | 18124 | - | intron | coding_transcript | ||
| 211292 | 211462 | 18125 | 18295 | - | exon | coding_transcript | ||
| 211292 | 211308 | 18125 | 18141 | - | cds | coding_transcript | ||
| 211309 | 211462 | 18142 | 18295 | - | five_prime_utr | coding_transcript | ||
| 211636 | 212687 | 18469 | 19520 | - | gene | thoc7 | coding_transcript | |
| 212275 | 216479 | 19108 | 23312 | + | gene | CG16940 | coding_transcript | |
| 216645 | 218058 | 23478 | 24891 | + | gene | Kaz1-ORFB | coding_transcript | |
| 217932 | 223069 | 24765 | 29902 | - | gene | pyx | coding_transcript | |
| 218067 | 218663 | 24900 | 25496 | + | gene | CG13877 | coding_transcript | |
| 224106 | 225605 | 30939 | 32438 | + | gene | CG33229 | coding_transcript | |
| 230971 | 231604 | 37804 | 38437 | - | gene | CG42846 | coding_transcript | |
| 231681 | 232350 | 38514 | 39183 | - | gene | CG34454 | coding_transcript | |
| 232480 | 233351 | 39313 | 40184 | - | gene | CG34453 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
CG7028[13887]::S000169_fly_pretag_fwd
GGATCTCCCTTAACCAGGCACTAGTTCATCCATTCATACAGGAGAAGATGgaagtgcataccaatcaggacccgc
|
Fasta
|
|
CG7028[13887]::S000169_fly_pretag_rev
AGAACTATGCGAAATTAAATTACGTTTCATTAACTTCGTCGGTCGATTTActtgtcgtcgtcatccttgtagtca
|
Fasta
|