Clone: 1367792136965469 D12
Tagged gene: mute
Identifier: FBgn0085444
Clone | FlyFos023127(pRedFlp-Hgr)(mute[38512]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2R | ||||||||
12846448 | 12847652 | 27084 | 28288 | + | gene | CG9010 | coding_transcript | |
12845007 | 12846436 | 28300 | 29729 | - | gene | CG6665 | coding_transcript | |
12842969 | 12844826 | 29910 | 31767 | - | gene | veg | coding_transcript | |
12835802 | 12842770 | 31966 | 39996 | + | gene | mute | coding_transcript | |
12835802 | 12842770 | 31966 | 39996 | + | mrna | FBtr0112691 | coding_transcript | |
12842160 | 12842770 | 31966 | 32576 | + | exon | coding_transcript | ||
12842661 | 12842770 | 31966 | 32075 | + | five_prime_utr | coding_transcript | ||
12842160 | 12842660 | 32076 | 32576 | + | cds | coding_transcript | ||
12842095 | 12842159 | 32577 | 32641 | + | intron | coding_transcript | ||
12841764 | 12842094 | 32642 | 32972 | + | exon | coding_transcript | ||
12841764 | 12842094 | 32642 | 32972 | + | cds | coding_transcript | ||
12841710 | 12841763 | 32973 | 33026 | + | intron | coding_transcript | ||
12840641 | 12841709 | 33027 | 34095 | + | exon | coding_transcript | ||
12840641 | 12841709 | 33027 | 34095 | + | cds | coding_transcript | ||
12840581 | 12840640 | 34096 | 34155 | + | intron | coding_transcript | ||
12840109 | 12840580 | 34156 | 34627 | + | exon | coding_transcript | ||
12840109 | 12840580 | 34156 | 34627 | + | cds | coding_transcript | ||
12839256 | 12840108 | 34628 | 35480 | + | intron | coding_transcript | ||
12839402 | 12840086 | 34650 | 35334 | - | gene | CG34191 | coding_transcript | |
12839402 | 12840086 | 34650 | 35334 | - | mrna | FBtr0112384 | coding_transcript | |
12839657 | 12840086 | 34650 | 35079 | - | exon | coding_transcript | ||
12840007 | 12840086 | 34650 | 34729 | - | three_prime_utr | coding_transcript | ||
12839743 | 12840006 | 34730 | 34993 | - | cds | coding_transcript | ||
12839657 | 12839742 | 34994 | 35079 | - | five_prime_utr | coding_transcript | ||
12839559 | 12839656 | 35080 | 35177 | - | intron | coding_transcript | ||
12839402 | 12839558 | 35178 | 35334 | - | exon | coding_transcript | ||
12839402 | 12839558 | 35178 | 35334 | - | five_prime_utr | coding_transcript | ||
12835802 | 12839318 | 35418 | 39996 | + | mrna | FBtr0112692 | coding_transcript | |
12838247 | 12839318 | 35418 | 36489 | + | exon | coding_transcript | ||
12838407 | 12839318 | 35418 | 36329 | + | five_prime_utr | coding_transcript | ||
12838247 | 12839255 | 35481 | 36489 | + | exon | coding_transcript | ||
12838247 | 12839255 | 35481 | 36489 | + | cds | coding_transcript | ||
12838247 | 12838406 | 36330 | 36489 | + | cds | coding_transcript | ||
12838180 | 12838246 | 36490 | 36556 | + | intron | coding_transcript | ||
12838180 | 12838246 | 36490 | 36556 | + | intron | coding_transcript | ||
12838046 | 12838179 | 36557 | 36690 | + | exon | coding_transcript | ||
12838046 | 12838179 | 36557 | 36690 | + | cds | coding_transcript | ||
12838046 | 12838179 | 36557 | 36690 | + | exon | coding_transcript | ||
12838046 | 12838179 | 36557 | 36690 | + | cds | coding_transcript | ||
12837986 | 12838045 | 36691 | 36750 | + | intron | coding_transcript | ||
12837986 | 12838045 | 36691 | 36750 | + | intron | coding_transcript | ||
12837657 | 12837985 | 36751 | 37079 | + | exon | coding_transcript | ||
12837657 | 12837985 | 36751 | 37079 | + | cds | coding_transcript | ||
12837657 | 12837985 | 36751 | 37079 | + | exon | coding_transcript | ||
12837657 | 12837985 | 36751 | 37079 | + | cds | coding_transcript | ||
12837596 | 12837656 | 37080 | 37140 | + | intron | coding_transcript | ||
12837596 | 12837656 | 37080 | 37140 | + | intron | coding_transcript | ||
12835802 | 12837595 | 37141 | 39996 | + | exon | coding_transcript | ||
12835802 | 12837595 | 37141 | 39996 | + | exon | coding_transcript | ||
12836221 | 12837595 | 37141 | 39577 | + | cds | coding_transcript | ||
12836221 | 12837595 | 37141 | 39577 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 38513 | 38572 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 38579 | 39295 | + | cds | SGFP | CLC | |
2271 | 2312 | 39302 | 39343 | + | cds | V5 | CLC | |
2313 | 2336 | 39344 | 39367 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 39368 | 39388 | + | cds | TEV | CLC | |
2358 | 2429 | 39389 | 39460 | + | cds | BLRP | CLC | |
3813 | 3846 | 39468 | 39501 | + | misc_recomb | FRT | CLC | |
dmel-5.43-2R | ||||||||
12835802 | 12836220 | 39578 | 39996 | + | three_prime_utr | coding_transcript | ||
12835802 | 12836220 | 39578 | 39996 | + | three_prime_utr | coding_transcript | ||
12835163 | 12835729 | 40069 | 40635 | + | gene | Vha16-4 | coding_transcript | |
12834710 | 12835018 | 40780 | 41088 | + | gene | CG34190 | coding_transcript | |
12833060 | 12834736 | 41062 | 42738 | - | gene | CG15614 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
mute[38512]::S000169_fly_pretag_fwd
GTAGTAGGCATCAGTTTCTTATGGACTTTCTGTCCAAATTGCAGGGAAAGgaagtgcataccaatcaggacccgc
|
Fasta |
mute[38512]::S000169_fly_pretag_rev
TATTTCAGCTTGGATTATAATACACAAAAGACCATCTTAGAGAAACCTCActtgtcgtcgtcatccttgtagtca
|
Fasta |