Clone: 1367792136965469 F11
Tagged gene: CG9853
Identifier: FBgn0086605
Clone | FlyFos023123(pRedFlp-Hgr)(CG9853[39843]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3R | ||||||||
204386 | 206932 | 19752 | 22298 | + | gene | CG11739 | coding_transcript | |
207032 | 212741 | 22398 | 28107 | + | gene | Cont | coding_transcript | |
212967 | 215535 | 28333 | 30901 | + | gene | tub | coding_transcript | |
216097 | 217833 | 31463 | 33199 | + | gene | CG14646 | coding_transcript | |
217433 | 219981 | 32799 | 35347 | - | gene | CG34112 | coding_transcript | |
221886 | 223609 | 37252 | 38975 | - | gene | CG9855 | coding_transcript | |
224280 | 227749 | 39646 | 44177 | - | gene | CG9853 | coding_transcript | |
224280 | 227749 | 39646 | 44177 | - | mrna | FBtr0113192 | coding_transcript | |
224280 | 225734 | 39646 | 42162 | - | mrna | FBtr0078949 | coding_transcript | |
224280 | 225107 | 39646 | 41535 | - | exon | coding_transcript | ||
224280 | 225107 | 39646 | 41535 | - | exon | coding_transcript | ||
224280 | 224474 | 39646 | 39840 | - | three_prime_utr | coding_transcript | ||
224280 | 224474 | 39646 | 39840 | - | three_prime_utr | coding_transcript | ||
224475 | 225107 | 39841 | 41535 | - | cds | coding_transcript | ||
224475 | 225107 | 39841 | 41535 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 39917 | 39950 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 39958 | 40029 | - | cds | BLRP | CLC | |
2337 | 2357 | 40030 | 40050 | - | cds | TEV | CLC | |
2313 | 2336 | 40051 | 40074 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 40075 | 40116 | - | cds | V5 | CLC | |
1548 | 2264 | 40123 | 40839 | - | cds | SGFP | CLC | |
1482 | 1541 | 40846 | 40905 | - | cds | 2xTY1 | CLC | |
dmel-5.43-3R | ||||||||
225108 | 225167 | 41536 | 41595 | - | intron | coding_transcript | ||
225108 | 225167 | 41536 | 41595 | - | intron | coding_transcript | ||
225168 | 225402 | 41596 | 41830 | - | exon | coding_transcript | ||
225168 | 225402 | 41596 | 41830 | - | cds | coding_transcript | ||
225168 | 225402 | 41596 | 41830 | - | exon | coding_transcript | ||
225168 | 225402 | 41596 | 41830 | - | cds | coding_transcript | ||
225403 | 225463 | 41831 | 41891 | - | intron | coding_transcript | ||
225403 | 225463 | 41831 | 41891 | - | intron | coding_transcript | ||
225464 | 225912 | 41892 | 42340 | - | exon | coding_transcript | ||
225464 | 225734 | 41892 | 42162 | - | exon | coding_transcript | ||
225464 | 225615 | 41892 | 42043 | - | cds | coding_transcript | ||
225464 | 225615 | 41892 | 42043 | - | cds | coding_transcript | ||
225616 | 225912 | 42044 | 42340 | - | five_prime_utr | coding_transcript | ||
225616 | 225734 | 42044 | 42162 | - | five_prime_utr | coding_transcript | ||
225913 | 227443 | 42341 | 43871 | - | intron | coding_transcript | ||
226212 | 227739 | 42640 | 44167 | + | gene | CG14647 | coding_transcript | |
226212 | 227739 | 42640 | 44167 | + | mrna | FBtr0290222 | coding_transcript | |
226212 | 226860 | 42640 | 43288 | + | exon | coding_transcript | ||
226212 | 226299 | 42640 | 42727 | + | five_prime_utr | coding_transcript | ||
226300 | 226860 | 42728 | 43288 | + | cds | coding_transcript | ||
226861 | 227075 | 43289 | 43503 | + | intron | coding_transcript | ||
227076 | 227207 | 43504 | 43635 | + | exon | coding_transcript | ||
227076 | 227207 | 43504 | 43635 | + | cds | coding_transcript | ||
227208 | 227322 | 43636 | 43750 | + | intron | coding_transcript | ||
227323 | 227739 | 43751 | 44167 | + | exon | coding_transcript | ||
227323 | 227637 | 43751 | 44065 | + | cds | coding_transcript | ||
227444 | 227749 | 43872 | 44177 | - | exon | coding_transcript | ||
227444 | 227749 | 43872 | 44177 | - | five_prime_utr | coding_transcript | ||
227638 | 227739 | 44066 | 44167 | + | three_prime_utr | coding_transcript | ||
228771 | 232914 | 45199 | 49342 | + | gene | lost | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG9853[39843]::S000169_fly_pretag_rev
CAGCAACAAAGGATCCCTCTTCGGTATGCTTCATTAATGCATACATGCTActtgtcgtcgtcatccttgtagtca
|
Fasta |
CG9853[39843]::S000169_fly_pretag_fwd
ACGATCATGACACGACCCTGAGGCGGCAAAACGAGAATAACGAACTGGAAgaagtgcataccaatcaggacccgc
|
Fasta |