Clone: 1367792136965469 F11

Tagged gene: CG9853
Identifier: FBgn0086605

Clone FlyFos023123(pRedFlp-Hgr)(CG9853[39843]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
204386 206932 19752 22298 + gene CG11739 coding_transcript
207032 212741 22398 28107 + gene Cont coding_transcript
212967 215535 28333 30901 + gene tub coding_transcript
216097 217833 31463 33199 + gene CG14646 coding_transcript
217433 219981 32799 35347 - gene CG34112 coding_transcript
221886 223609 37252 38975 - gene CG9855 coding_transcript
224280 227749 39646 44177 - gene CG9853 coding_transcript
224280 227749 39646 44177 - mrna FBtr0113192 coding_transcript
224280 225734 39646 42162 - mrna FBtr0078949 coding_transcript
224280 225107 39646 41535 - exon coding_transcript
224280 225107 39646 41535 - exon coding_transcript
224280 224474 39646 39840 - three_prime_utr coding_transcript
224280 224474 39646 39840 - three_prime_utr coding_transcript
224475 225107 39841 41535 - cds coding_transcript
224475 225107 39841 41535 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 39917 39950 - misc_recomb FRT CLC
2358 2429 39958 40029 - cds BLRP CLC
2337 2357 40030 40050 - cds TEV CLC
2313 2336 40051 40074 - cds Precision cut site CLC
2271 2312 40075 40116 - cds V5 CLC
1548 2264 40123 40839 - cds SGFP CLC
1482 1541 40846 40905 - cds 2xTY1 CLC
dmel-5.43-3R
225108 225167 41536 41595 - intron coding_transcript
225108 225167 41536 41595 - intron coding_transcript
225168 225402 41596 41830 - exon coding_transcript
225168 225402 41596 41830 - cds coding_transcript
225168 225402 41596 41830 - exon coding_transcript
225168 225402 41596 41830 - cds coding_transcript
225403 225463 41831 41891 - intron coding_transcript
225403 225463 41831 41891 - intron coding_transcript
225464 225912 41892 42340 - exon coding_transcript
225464 225734 41892 42162 - exon coding_transcript
225464 225615 41892 42043 - cds coding_transcript
225464 225615 41892 42043 - cds coding_transcript
225616 225912 42044 42340 - five_prime_utr coding_transcript
225616 225734 42044 42162 - five_prime_utr coding_transcript
225913 227443 42341 43871 - intron coding_transcript
226212 227739 42640 44167 + gene CG14647 coding_transcript
226212 227739 42640 44167 + mrna FBtr0290222 coding_transcript
226212 226860 42640 43288 + exon coding_transcript
226212 226299 42640 42727 + five_prime_utr coding_transcript
226300 226860 42728 43288 + cds coding_transcript
226861 227075 43289 43503 + intron coding_transcript
227076 227207 43504 43635 + exon coding_transcript
227076 227207 43504 43635 + cds coding_transcript
227208 227322 43636 43750 + intron coding_transcript
227323 227739 43751 44167 + exon coding_transcript
227323 227637 43751 44065 + cds coding_transcript
227444 227749 43872 44177 - exon coding_transcript
227444 227749 43872 44177 - five_prime_utr coding_transcript
227638 227739 44066 44167 + three_prime_utr coding_transcript
228771 232914 45199 49342 + gene lost coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG9853[39843]::S000169_fly_pretag_rev
CAGCAACAAAGGATCCCTCTTCGGTATGCTTCATTAATGCATACATGCTActtgtcgtcgtcatccttgtagtca
fasta Fasta
CG9853[39843]::S000169_fly_pretag_fwd
ACGATCATGACACGACCCTGAGGCGGCAAAACGAGAATAACGAACTGGAAgaagtgcataccaatcaggacccgc
fasta Fasta